RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 DCST1Q5T197 706 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ATAD3BQ5T9A4 648 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 FRMPD2BQ6IN97 320 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ZNF425Q6IV72 752 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SLC48A1Q6P1K1 146 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 TNFAIP8L2Q6P589 184 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 GDPGP1Q6ZNW5 385 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 C22orf34Q6ZV56 151 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 PTCHD4Q6ZW05 846 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 AHSA2Q719I0 299 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ZNF367Q7RTV3 350 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 NRROSQ86YC3 692 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 PLD3Q8IV08 490 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 CCDC71Q8IV32 467 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 STX19Q8N4C7 294 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 C2orf73Q8N5S3 287 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 AMER2Q8N7J2 671 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ACOT4Q8N9L9 421 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 AQP11Q8NBQ7 271 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 KBTBD8Q8NFY9 601 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 OR2L3Q8NG85 312 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 OR4E2Q8NGC2 313 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 OR52E1Q8NGJ3 308 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 B4GALNT2Q8NHY0 566 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SUN3Q8TAQ9 357 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 NT5CQ8TCD5 201 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 THAP3Q8WTV1 239 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 APOBEC4Q8WW27 367 aaKnown RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 APH1BQ8WW43 257 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 PMM1Q92871 262 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 EXOSC8Q96B26 276 aaKnown RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 MS4A6EQ96DS6 147 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 LGALS12Q96DT0 336 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SH3YL1Q96HL8 342 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 COX4I2Q96KJ9 171 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 DACH2Q96NX9 599 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 CSF3RQ99062 836 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 TREX2Q9BQ50 279 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 PINK1Q9BXM7 581 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 TEX12Q9BXU0 123 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 PRRG3Q9BZD7 231 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 MMP27Q9H306 513 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SRMSQ9H3Y6 488 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 GLIPR2Q9H4G4 154 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ANKRD19PQ9H560 264 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 C7orf69Q9H7B7 122 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 NMNAT1Q9HAN9 279 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 PRDM7Q9NQW5 492 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 RASSF1Q9NS23 344 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SIRT3Q9NTG7 399 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 ZCCHC3Q9NUD5 404 aaKnown RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 MS4A12Q9NXJ0 267 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ZNF624Q9P2J8 865 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 CPNE7Q9UBL6 633 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 NDOR1Q9UHB4 597 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 PHF11Q9UIL8 331 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SLC13A4Q9UKG4 626 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ACSL6Q9UKU0 697 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 ASB4Q9Y574 426 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 KLK4Q9Y5K2 254 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 PCYT1BQ9Y5K3 369 aaPredicted RBP5.38□□□□□ -1.55
SDF2-206ENST00000587788 ZNF780BQ9Y6R6 833 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 DSPPQ9NZW4 1301 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 SPTBN4Q9H254 2564 aa5.38□□□□□ -1.55
SDF2-206ENST00000587788 CROCCQ5TZA2 2017 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 IGKV1-8A0A0C4DH67 115 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 A0A1B0GVG6 124 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 FEZF1A0PJY2 475 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 PRAMEF25A6NGN4 478 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 SAGE2PA6NJ88 616 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 EFCAB9A8MZ26 197 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 TAF4O00268 1085 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 RTCAO00442 366 aaKnown RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 KPNA4O00629 521 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 PCDH17O14917 1159 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 SCAMP1O15126 338 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 AQP9O43315 295 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 ERI3O43414 337 aaKnown RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 PROM1O43490 865 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 TNFSF14O43557 240 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 AIREO43918 545 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 LCMT2O60294 686 aaKnown RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 FOXD2O60548 495 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 NADKO95544 446 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 ZBTB11O95625 1053 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 LGI1O95970 557 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 GASTP01350 101 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 RPLP0P05388 317 aaKnown RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 SERPIND1P05546 499 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 SYPP08247 313 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 CHRM5P08912 532 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 OR12D1P0DN82 309 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 NAT2P11245 290 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 CD36P16671 472 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 GABRB1P18505 474 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 AK4P27144 223 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 PSMB5P28074 263 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 TLX1P31314 330 aaPredicted RBP5.37□□□□□ -1.55
SDF2-206ENST00000587788 BCL6P41182 706 aa5.37□□□□□ -1.55
SDF2-206ENST00000587788 BUD31P41223 144 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms