RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 IKZF5Q9H5V7 419 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 CMTM6Q9NX76 183 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 LRFN1Q9P244 771 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 PCSK5Q92824 1860 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 DMXL2Q8TDJ6 3036 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 NME4O00746 187 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 SCDO00767 359 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 DPM1O60762 260 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 OR6B1O95007 311 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 H6PDO95479 791 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 WDPCPO95876 746 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 P04436 131 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 BCHEP06276 602 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 HSD17B1P14061 328 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 ETS2P15036 469 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 CD46P15529 392 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 HTR1EP28566 365 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 CD96P40200 585 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 ATP12AP54707 1039 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 SNTA1Q13424 505 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 SELPLGQ14242 412 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 ZSCAN26Q16670 478 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 ST3GAL2Q16842 350 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 C16orf47Q6ZP98 133 aaPredicted RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 PATL1Q86TB9 770 aaKnown RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 MICU2Q8IYU8 434 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 PRR22Q8IZ63 422 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 ZNF619Q8N2I2 560 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 RASSF5Q8WWW0 418 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 POP5Q969H6 163 aaKnown RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 EFHD2Q96C19 240 aaPredicted RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 SLC7A6OSQ96CW6 309 aaPredicted RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 OTUB1Q96FW1 271 aaPredicted RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 C5orf34Q96MH7 638 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 THTPAQ9BU02 230 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 ZNF350Q9GZX5 532 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 BCL2L10Q9HD36 194 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 SUCOQ9UBS9 1254 aaKnown RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 IFT52Q9Y366 437 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
SKA2-205ENST00000580541 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.15□□□□□ -0.3
SKA2-205ENST00000580541 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 PGM3O95394 542 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 UTS2O95399 124 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 NGFRP08138 427 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TBXA2RP21731 343 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 ME2P23368 584 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 PCGF2P35227 344 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 PGM1P36871 562 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 BNIP2Q12982 314 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 KCNAB2Q13303 367 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
SKA2-205ENST00000580541 GPR68Q15743 365 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 ADRM1Q16186 407 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 SYPL1Q16563 259 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TMEM81Q6P7N7 255 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TUBA3EQ6PEY2 450 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 MISPQ8IVT2 679 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 ANKFN1Q8N957 763 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TMEM178AQ8NBL3 297 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 SLC26A7Q8TE54 656 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 MAL2Q969L2 176 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TMEM19Q96HH6 336 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TREX2Q9BQ50 279 aaPredicted RBP13.14□□□□□ -0.31
SKA2-205ENST00000580541 TBL1XR1Q9BZK7 514 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 PIF1Q9H611 641 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 METTL7AQ9H8H3 244 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 SACM1LQ9NTJ5 587 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 PCDHGB6Q9Y5F9 930 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 PCDHGA10Q9Y5H3 936 aa13.14□□□□□ -0.31
SKA2-205ENST00000580541 TRAV17A0A0B4J275 112 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 ANKRD33BA6NCL7 494 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 KLRC4-KLRK1H3BQV0 150 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 GSC2O15499 205 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 MAN1A2O60476 641 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 UGT2B11O75310 529 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 SNX4O95219 450 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
SKA2-205ENST00000580541 NUDT7P0C024 238 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 CYP4B1P13584 511 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 IL7RP16871 459 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 GSK3BP49841 420 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 GZMMP51124 257 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 FBXW4P57775 412 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 OR1C1Q15619 314 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 CCNJQ5T5M9 372 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 FBXW8Q8N3Y1 598 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 OR5M3Q8NGP4 307 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms