RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RNF144AP50876 292 aaPredicted RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 GZMMP51124 257 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 CRISP3P54108 245 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 KCNAB2Q13303 367 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 EFR3AQ14156 821 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 GNA13Q14344 377 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 OR1C1Q15619 314 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 MAPK11Q15759 364 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 NTRK2Q16620 822 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 ZSCAN26Q16670 478 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.16□□□□□ -0.62
IFT20-207ENST00000578547 VMACQ2NL98 169 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 ZNF791Q3KP31 576 aaPredicted RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 SAMD4BQ5PRF9 694 aaKnown RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 REEP3Q6NUK4 255 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 RTL4Q6ZR62 310 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 MICU2Q8IYU8 434 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 ZNF614Q8N883 585 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 FAM156AQ8NDB6 213 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 TM9SF4Q92544 642 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 MCUR1Q96AQ8 359 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 CLPTM1LQ96KA5 538 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 TRNT1Q96Q11 434 aaKnown RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 SMAD5Q99717 465 aaKnown RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 THTPAQ9BU02 230 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 SPATA9Q9BWV2 254 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 ZNF350Q9GZX5 532 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.16□□□□□ -0.62
IFT20-207ENST00000578547 QRSL1Q9H0R6 528 aaKnown RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 TMEM38AQ9H6F2 299 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 CALML5Q9NZT1 146 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 FLRT3Q9NZU0 649 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 LRFN1Q9P244 771 aa11.16□□□□□ -0.62
IFT20-207ENST00000578547 PRPF19Q9UMS4 504 aaKnown RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 PCDHGA9Q9Y5G4 932 aaKnown RBP11.16□□□□□ -0.62
IFT20-207ENST00000578547 ELOVL7A1L3X0 281 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 ERICH4A6NGS2 130 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 G3V3Y1 287 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 TP53I11O14683 189 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 KIAA0513O60268 411 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 DNAJA2O60884 412 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 DNAJC8O75937 253 aaPredicted RBP11.15□□□□□ -0.62
IFT20-207ENST00000578547 HPGDP15428 266 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 NAGAP17050 411 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 PCGF2P35227 344 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 MSX2P35548 267 aaPredicted RBP11.15□□□□□ -0.62
IFT20-207ENST00000578547 DCTP40126 519 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 PNLIPRP2P54317 469 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 CHRNEQ04844 493 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 RBBP4Q09028 425 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 CEACAM7Q14002 265 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 GRAMD1BQ3KR37 738 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 PRAMEF20Q5VT98 475 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 TYW3Q6IPR3 259 aaKnown RBP11.15□□□□□ -0.62
IFT20-207ENST00000578547 ERICH5Q6P6B1 374 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 FRRS1Q6ZNA5 592 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 NUP54Q7Z3B4 507 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 MDGA2Q7Z553 956 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 GPALPP1Q8IXQ4 340 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 DND1Q8IYX4 353 aaKnown RBP11.15□□□□□ -0.62
IFT20-207ENST00000578547 ZNF619Q8N2I2 560 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 HIPK4Q8NE63 616 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 BBS10Q8TAM1 723 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 FAM110BQ8TC76 370 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 HGDQ93099 445 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.62
IFT20-207ENST00000578547 TMCO6Q96DC7 493 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 NODALQ96S42 347 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 TREX2Q9BQ50 279 aaPredicted RBP11.15□□□□□ -0.62
IFT20-207ENST00000578547 SLC38A1Q9H2H9 487 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 LRMDAQ9H2I8 198 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 METTL7AQ9H8H3 244 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 EGFL7Q9UHF1 273 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 TP53TG5Q9Y2B4 290 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 ZNF451Q9Y4E5 1061 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 CSAG2Q9Y5P2 127 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 EXPH5Q8NEV8 1989 aa11.15□□□□□ -0.62
IFT20-207ENST00000578547 TNRC6AQ8NDV7 1962 aaKnown RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 CENPVL1A0A0U1RR11 272 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 PRAMEF25A6NGN4 478 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 SCDO00767 359 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 SCO2O43819 266 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 SLC25A12O75746 678 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 SORBS2O94875 1100 aaKnown RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 PGM3O95394 542 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 OXSR1O95747 527 aaPredicted RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 CCL3P10147 92 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 NCK1P16333 377 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 EVI2BP34910 448 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 PGM1P36871 562 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 CD97P48960 835 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 RPP38P78345 283 aaKnown RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 LRRC23Q53EV4 343 aaPredicted RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 LACTB2Q53H82 288 aaPredicted RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 BICRALQ6AI39 1079 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms