RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 VMP1Q96GC9 406 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 MAGED4Q96JG8 741 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC35G5Q96KT7 338 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 BTBD9Q96Q07 612 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 RAB3IPQ96QF0 476 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 NUDT9Q9BW91 350 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR8D2Q9GZM6 311 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 MUC13Q9H3R2 512 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SERHL2Q9H4I8 314 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 GORASP2Q9H8Y8 452 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ANKRA2Q9H9E1 313 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 MMP25Q9NPA2 562 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 A4GALTQ9NPC4 353 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 BCAP29Q9UHQ4 241 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 GPR55Q9Y2T6 319 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 LAMA5O15230 3695 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CFAP47Q6ZTR5 3102 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PTPRBP23467 1997 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 NCOR2Q9Y618 2525 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 NSG1A0A0A6YYJ2 146 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 C2orf92A0A1B0GVN3 265 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 FAM220BPB1ANY3 271 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PEX12O00623 359 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ACOT8O14734 319 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 TO15178 435 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ACOX3O15254 700 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SEC24DO94855 1032 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 AK1P00568 194 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ALOX5P09917 674 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR12D1P0DN82 309 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 LIFP15018 202 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 NQO1P15559 274 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 SPINK2P20155 84 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 KHKP50053 298 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CLCN2P51788 898 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 DSTNP60981 165 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 GNA13Q14344 377 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 EBPQ15125 230 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZNHIT3Q15649 155 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 CYP27C1Q4G0S4 372 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 H3F3CQ6NXT2 135 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ANGPTL8Q6UXH0 198 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 HSDL2Q6YN16 418 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CCDC80Q76M96 950 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC29A4Q7RTT9 530 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 MRGPREQ86SM8 312 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PROSER1Q86XN7 944 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 HPS6Q86YV9 775 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZNF321PQ8N8H1 164 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZNF441Q8N8Z8 693 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 C11orf65Q8NCR3 313 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 FAM110BQ8TC76 370 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PNPT1Q8TCS8 783 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC38A5Q8WUX1 472 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 XAGE5Q8WWM1 108 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 POP5Q969H6 163 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 NCLNQ969V3 563 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ASB9Q96DX5 294 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CLPTM1LQ96KA5 538 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 TRNT1Q96Q11 434 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR7D2Q96RA2 312 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 KCTD14Q9BQ13 255 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 MESP1Q9BRJ9 268 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 TRIM8Q9BZR9 551 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR51I1Q9H343 314 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 FOLH1BQ9HBA9 442 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 BCL2L10Q9HD36 194 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 EXD2Q9NVH0 621 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 P4HTMQ9NXG6 502 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PRR13Q9NZ81 148 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC7A8Q9UHI5 535 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZNF223Q9UK11 482 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 FRG2CA6NGY1 282 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 TMEM200CA6NKL6 621 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 SERPINA7P05543 415 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 CPEP16870 476 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 NAGAP17050 411 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 LCN1P31025 176 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 OTX2P32243 289 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 GABRA3P34903 492 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 TRHRP34981 398 aaPredicted RBP7.4□□□□□ -1.22
COPS3-215ENST00000578317 SOX8P57073 446 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 KCNJ2P63252 427 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 CDK6Q00534 326 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 IL10RAQ13651 578 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 DUSP5Q16690 384 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 CYP51A1Q16850 503 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 ARHGAP11BQ3KRB8 267 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 GCNT6Q5T4J0 391 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 ATAD3BQ5T9A4 648 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 INTS11Q5TA45 600 aaKnown RBP7.4□□□□□ -1.22
COPS3-215ENST00000578317 GTF2IRD2BQ6EKJ0 949 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 JMJD6Q6NYC1 403 aaPredicted RBP7.4□□□□□ -1.22
COPS3-215ENST00000578317 TNFAIP8L2Q6P589 184 aaPredicted RBP7.4□□□□□ -1.22
COPS3-215ENST00000578317 LRRC74BQ6ZQY2 392 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 SZRD1Q7Z422 152 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 GTF2IRD2Q86UP8 949 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 C9orf40Q8IXQ3 194 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms