RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 NCOR1O75376 2440 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 TOR1AO14656 332 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 PGRMC2O15173 223 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 PROM1O43490 865 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 DPM1O60762 260 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 IFNA16P05015 189 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 SMIM10L1P0DMW3 83 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 MYL9P24844 172 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 NTSP30990 170 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 CSNK1EP49674 416 aaKnown RBP12.93□□□□□ -0.34
RNF43-202ENST00000577625 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
RNF43-202ENST00000577625 BAMBIQ13145 260 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 IQCCQ4KMZ1 466 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 CRB2Q5IJ48 1285 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 CLVS2Q5SYC1 327 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 SHQ1Q6PI26 577 aaKnown RBP12.93□□□□□ -0.34
RNF43-202ENST00000577625 CEACAM20Q6UY09 585 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 C6orf120Q7Z4R8 191 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 CDH24Q86UP0 819 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 RDH10Q8IZV5 341 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 VWA5B2Q8N398 1253 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 ZCCHC10Q8TBK6 192 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 SMIM10Q96HG1 83 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 C7orf34Q96L11 122 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 MAPKAP1Q9BPZ7 522 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 COQ3Q9NZJ6 369 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 CES1P1Q9UKY3 287 aa12.93□□□□□ -0.34
RNF43-202ENST00000577625 URADA6NGE7 173 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 PCP4L1A6NKN8 68 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 H0YGG7 62 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 I3L521 148 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 M0R082 166 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 AKR7A2O43488 359 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 B4GALT2O60909 372 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 CCT3P49368 545 aaKnown RBP12.92□□□□□ -0.34
RNF43-202ENST00000577625 ITGA1P56199 1179 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 ARF3P61204 181 aaPredicted RBP12.92□□□□□ -0.34
RNF43-202ENST00000577625 FOXD4Q12950 439 aaPredicted RBP12.92□□□□□ -0.34
RNF43-202ENST00000577625 IKZF1Q13422 519 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 SPDYE7PQ495Y7 208 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 ZBTB37Q5TC79 503 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 KIF18BQ86Y91 864 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 FRMD6Q96NE9 622 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 PRRG3Q9BZD7 231 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 DUSP15Q9H1R2 295 aaPredicted RBP12.92□□□□□ -0.34
RNF43-202ENST00000577625 MMP28Q9H239 520 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 A4GALTQ9NPC4 353 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 VNN3Q9NY84 501 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 PADI2Q9Y2J8 665 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 ZDBF2Q9HCK1 2354 aa12.92□□□□□ -0.34
RNF43-202ENST00000577625 LMO7DNF2Z398 122 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 TSPAN4O14817 238 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 IFNA14P01570 189 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 PRKACGP22612 351 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 IGFBP5P24593 272 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 GPC1P35052 558 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 NCBP2P52298 156 aaKnown RBP eCLIP12.91□□□□□ -0.34
RNF43-202ENST00000577625 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■■□□ 18.7
RNF43-202ENST00000577625 PPP1R8Q12972 351 aaKnown RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 GALEQ14376 348 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 TIGD6Q17RP2 521 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 ARSKQ6UWY0 536 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 TMEM64Q6YI46 380 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 C17orf82Q86X59 251 aaPredicted RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 HORMAD2Q8N7B1 307 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 CAMKVQ8NCB2 501 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 KLHL6Q8WZ60 621 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 CNRIP1Q96F85 164 aaPredicted RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 RHNO1Q9BSD3 238 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 HDHD5Q9BXW7 423 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 GABARAPL1Q9H0R8 117 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 C3orf14Q9HBI5 128 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 MRPS2Q9Y399 296 aaKnown RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 U3KQV3 271 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 A0A075B6Q4 140 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 LILRA5A6NI73 299 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 UBXN7O94888 489 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 OPN1SWP03999 348 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 ST6GAL1P15907 406 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 RPS26P62854 115 aaKnown RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 CSNK2BP67870 215 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 DUSP2Q05923 314 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 ASAH1Q13510 395 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 IRF3Q14653 427 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 CEBPEQ15744 281 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 TBCEQ15813 527 aaPredicted RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 DEFB134Q4QY38 66 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 REEP3Q6NUK4 255 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 ARMC6Q6NXE6 501 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms