RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 NCR1O76036 304 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 CSF2P04141 144 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 IFNA8P32881 189 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ERVK-21P61565 698 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 IFITM2Q01629 132 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ID2Q02363 134 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 SCN1BQ07699 218 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 PYDC2Q56P42 97 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ATAD3CQ5T2N8 411 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 PRAMEF8Q5VWM4 474 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 PRAMEF7Q5VXH5 474 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ZNF544Q6NX49 715 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 HSDL2Q6YN16 418 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 QSOX2Q6ZRP7 698 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 GDF7Q7Z4P5 450 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 MRGPREQ86SM8 312 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 RAB43Q86YS6 212 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 GALNT12Q8IXK2 581 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ATP6V1C2Q8NEY4 427 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 CCL4L1Q8NHW4 92 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ACOT11Q8WXI4 607 aaPredicted RBP10.49□□□□□ -0.73
RPAIN-212ENST00000573126 HERVK_113Q902F9 699 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 SLC41A3Q96GZ6 507 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 RPP25Q9BUL9 199 aaKnown RBP10.49□□□□□ -0.73
RPAIN-212ENST00000573126 TP63Q9H3D4 680 aaPredicted RBP10.49□□□□□ -0.73
RPAIN-212ENST00000573126 DDX28Q9NUL7 540 aaKnown RBP10.49□□□□□ -0.73
RPAIN-212ENST00000573126 TMEM74BQ9NUR3 256 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 SLC7A7Q9UM01 511 aa10.49□□□□□ -0.73
RPAIN-212ENST00000573126 ZNF860A6NHJ4 632 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 RNGTTO60942 597 aaKnown RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 FUT1P19526 365 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 GDI1P31150 447 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 GABRA5P31644 462 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PPP2CBP62714 309 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PPP2CAP67775 309 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 BCL2A1Q16548 175 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ZNF776Q68DI1 518 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 MFSD12Q6NUT3 480 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 SMARCD3Q6STE5 483 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 LRRC25Q8N386 305 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PHOSPHO2Q8TCD6 241 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 C10orf90Q96M02 699 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 SECISBP2Q96T21 854 aaKnown RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PRRG3Q9BZD7 231 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 C11orf54Q9H0W9 315 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 IL20Q9NYY1 176 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 CALML5Q9NZT1 146 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 SNX7Q9UNH6 387 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 EXOSC1Q9Y3B2 195 aaKnown RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 WDR45Q9Y484 360 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PRSS38A1L453 326 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 SOCS6O14544 535 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 TCEA1P23193 301 aaKnown RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 FPR3P25089 353 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 PRKAR1BP31321 381 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 GCGRP47871 477 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ADPRHP54922 357 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 GPR68Q15743 365 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 CEBPEQ15744 281 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 DUSP5Q16690 384 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 DUSP6Q16828 381 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 AADACL4Q5VUY2 407 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ZNF620Q6ZNG0 422 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 TMEFF1Q8IYR6 380 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 GJD3Q8N144 294 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 POGLUT1Q8NBL1 392 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ZNF485Q8NCK3 441 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 NLGN4YQ8NFZ3 816 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 OSTF1Q92882 214 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 NACC2Q96BF6 587 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ART5Q96L15 291 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 SARGQ9BW04 601 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ITGB1BP2Q9UKP3 347 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 ZNF443Q9Y2A4 671 aaPredicted RBP10.48□□□□□ -0.73
RPAIN-212ENST00000573126 GSTK1Q9Y2Q3 226 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 N6AMT1Q9Y5N5 214 aa10.48□□□□□ -0.73
RPAIN-212ENST00000573126 C2orf92A0A1B0GVN3 265 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 SHISA3A0PJX4 238 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 IRGMA1A4Y4 181 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 MEIOCA2RUB1 952 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 DVL2O14641 736 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 GKN3PP0CG01 181 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 PRG2P13727 222 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 CPN2P22792 545 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 APEX1P27695 318 aaKnown RBP10.47□□□□□ -0.73
RPAIN-212ENST00000573126 TEAD1P28347 426 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 ENPP2Q13822 863 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 PGGHGQ32M88 737 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 XKRXQ6PP77 449 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 CPOQ8IVL8 374 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 CHAC2Q8WUX2 184 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 ZFPM2Q8WW38 1151 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 FGF14Q92915 247 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 RFKQ969G6 155 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 SAMD8Q96LT4 415 aa10.47□□□□□ -0.73
RPAIN-212ENST00000573126 MS4A4EQ96PG1 132 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms