RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 STRADBQ9C0K7 418 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 OR2AG1Q9H205 316 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 TCEAL2Q9H3H9 227 aaPredicted RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 SLA2Q9H6Q3 261 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 SUDS3Q9H7L9 328 aaPredicted RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 C10orf88Q9H8K7 445 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 VPS37BQ9H9H4 285 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 FGF22Q9HCT0 170 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 IL26Q9NPH9 171 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 MRPL40Q9NQ50 206 aaKnown RBP3.6□□□□□ -1.83
NUP88-202ENST00000570937 SMOXQ9NWM0 555 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 IL17CQ9P0M4 197 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 RNF14Q9UBS8 474 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 CRLS1Q9UJA2 301 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 ANAPC5Q9UJX4 755 aa3.6□□□□□ -1.83
NUP88-202ENST00000570937 CACNA1EQ15878 2313 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 COL5A1P20908 1838 aaPredicted RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 PLXNA2O75051 1894 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 A0A0U1RQS6 177 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 DUXAA6NLW8 204 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 PDZK1P1A8MUH7 402 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CHUKO15111 745 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 RRP8O43159 456 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 MITFO75030 526 aaPredicted RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 SRP72O76094 671 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 AP2A2O94973 939 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CPNE6O95741 557 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SOD1P00441 154 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 RPLP0P05388 317 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 PROS1P07225 676 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 GIMD1P0DJR0 217 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 F3P13726 295 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 XRCC1P18887 633 aaPredicted RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 EPHA2P29317 976 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 RBMS1P29558 406 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 NPY2RP49146 381 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 FNTAP49354 379 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 BASP1P80723 227 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 PPP2R2BQ00005 443 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CACNG1Q06432 222 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 NFATC2Q13469 925 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 IRF3Q14653 427 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 POU6F1Q14863 301 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 PPP1R7Q15435 360 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CHRNA6Q15825 494 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 ISXQ2M1V0 245 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 GCNT6Q5T4J0 391 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 KCTD11Q693B1 232 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 GUSBP11Q6P575 273 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 IYDQ6PHW0 289 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CCDC137Q6PK04 289 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 FAM151BQ6UXP7 276 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 WASH2PQ6VEQ5 465 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CERS6Q6ZMG9 384 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 RFLNAQ6ZTI6 216 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 TAS2R42Q7RTR8 314 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SNX20Q7Z614 316 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 PCGF5Q86SE9 256 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 DDHD1Q8NEL9 900 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 OR4K2Q8NGD2 314 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 OR10G6Q8NH81 332 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 PEX13Q92968 403 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 WBP1Q96G27 269 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SMIM14Q96QK8 99 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 RANBP9Q96S59 729 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 COPS8Q99627 209 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 TREX2Q9BQ50 279 aaPredicted RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 APOL2Q9BQE5 337 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CCDC3Q9BQI4 270 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 PSD2Q9BQI7 771 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 TIMM29Q9BSF4 260 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 CCM2Q9BSQ5 444 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 TSSK1BQ9BXA7 367 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 IL22Q9GZX6 179 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 GFRA4Q9GZZ7 299 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 LRRN3Q9H3W5 708 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 OSGEPL1Q9H4B0 414 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 ASB8Q9H765 288 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SYNDIG1Q9H7V2 258 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 XAB2Q9HCS7 855 aaKnown RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 NLE1Q9NVX2 485 aaPredicted RBP3.59□□□□□ -1.83
NUP88-202ENST00000570937 COQ3Q9NZJ6 369 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 BFARQ9NZS9 450 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 ATXN10Q9UBB4 475 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 KLK13Q9UKR3 277 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SNX12Q9UMY4 172 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 ARL5AQ9Y689 179 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SAR1BQ9Y6B6 198 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 COLEC10Q9Y6Z7 277 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 ADAMTS9Q9P2N4 1935 aa3.59□□□□□ -1.83
NUP88-202ENST00000570937 SPTBN4Q9H254 2564 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 SHROOM3Q8TF72 1996 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CEP250Q9BV73 2442 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 FAM149AA5PLN7 773 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TRABD2BA6NFA1 517 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 MGAT4DA6NG13 374 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 SDR42E2A6NKP2 422 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 A6NL46 340 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms