RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ELAVL2Q12926 359 aaKnown RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 CHI3L2Q15782 390 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ZIC1Q15915 447 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 PCK2Q16822 640 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 CELF3Q5SZQ8 465 aaKnown RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 C9orf66Q5T8R8 295 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 SEL1L3Q68CR1 1132 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 PMF1Q6P1K2 205 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ARMCX5Q6P1M9 558 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 SCYL2Q6P3W7 929 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 EMBQ6PCB8 327 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ZNF613Q6PF04 617 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ZNF329Q86UD4 541 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 EIF1ADQ8N9N8 165 aaKnown RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 MIPOL1Q8TD10 442 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 RPL3LQ92901 407 aaKnown RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ZNF597Q96LX8 424 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 LINC00479Q96M42 142 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 AGAP3Q96P47 875 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 OMDQ99983 421 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 SLC30A2Q9BRI3 323 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 TMEM121Q9BTD3 319 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 MCRIP2Q9BUT9 160 aaKnown RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 EDEM2Q9BV94 578 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 POLR3FQ9H1D9 316 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 JPT2Q9H910 190 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 C6orf203Q9P0P8 240 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-209ENST00000566240 CC2D2AQ9P2K1 1620 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 GALPQ9UBC7 116 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 CTSZQ9UBR2 303 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 MUTYHQ9UIF7 546 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 WDR45Q9Y484 360 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 ASB3Q9Y575 518 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 BIVM-ERCC5R4GMW8 1640 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 SPACA6W5XKT8 324 aa4.08□□□□□ -1.76
CNOT1-209ENST00000566240 WRNQ14191 1432 aaPredicted RBP eCLIP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 METP08581 1390 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 STX7O15400 261 aaKnown RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 LINC01565O15544 149 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 NUDT21O43809 227 aaKnown RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 GPRIN2O60269 458 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 B3GAT3O94766 335 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 JCHAINP01591 159 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 IGF1P05019 195 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 IGFBP1P08833 259 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 SNRPCP09234 159 aaKnown RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 WNT2P09544 360 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 RPS2P15880 293 aaKnown RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 PBLDP30039 288 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 DHPSP49366 369 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 GSK3BP49841 420 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 PRELPP51888 382 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ARHGDIAP52565 204 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 PLA2G16P53816 162 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ATXN7L3Q14CW9 347 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 SYPL1Q16563 259 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 RABL6Q3YEC7 729 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 C14orf28Q4W4Y0 310 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 MS4A13Q5J8X5 152 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ATF7IP2Q5U623 682 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 RFWD3Q6PCD5 774 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 HSD11B1LQ7Z5J1 315 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 CEACAM19Q7Z692 300 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 PHC2Q8IXK0 858 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ZNF683Q8IZ20 524 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ARL14Q8N4G2 192 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 C4orf32Q8N8J7 132 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ANKFN1Q8N957 763 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 FLVCR1-AS1Q8TAF5 88 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 FNDC8Q8TC99 324 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 TBCKQ8TEA7 893 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 CRYGNQ8WXF5 182 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 MRPL39Q9NYK5 338 aaKnown RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 RAI14Q9P0K7 980 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 RCOR3Q9P2K3 495 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 CYTH4Q9UIA0 394 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 ANAPC7Q9UJX3 599 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 BARX2Q9UMQ3 279 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-209ENST00000566240 CLEC4AQ9UMR7 237 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 GMPPBQ9Y5P6 360 aa4.07□□□□□ -1.76
CNOT1-209ENST00000566240 FOXI3A8MTJ6 420 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-209ENST00000566240 RAMP1O60894 148 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 SURF6O75683 361 aaKnown RBP4.06□□□□□ -1.76
CNOT1-209ENST00000566240 IGHV3-9P01782 118 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 IGHG3P01860 377 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 BCKDHAP12694 445 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 NOVA1P51513 510 aaKnown RBP4.06□□□□□ -1.76
CNOT1-209ENST00000566240 PLOD1Q02809 727 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-209ENST00000566240 CD300CQ08708 224 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 PDK3Q15120 406 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 C17orf58Q2M2W7 97 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 TMEM44Q2T9K0 475 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 TMEM52BQ4KMG9 183 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 KLHL22Q53GT1 634 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 FAM182AQ5T1J6 154 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 ZC2HC1BQ5TFG8 222 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 KIAA1328Q86T90 577 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 TMEM17Q86X19 198 aa4.06□□□□□ -1.76
CNOT1-209ENST00000566240 LRRC49Q8IUZ0 686 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms