RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PINK1Q9BXM7 581 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 RTN4RQ9BZR6 473 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 REEP4Q9H6H4 257 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 GALNT8Q9NY28 637 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 JKAMPQ9P055 326 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 PACSIN3Q9UKS6 424 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 ABCG2Q9UNQ0 655 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 TRAF6Q9Y4K3 522 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 CCL27Q9Y4X3 112 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 UTP20O75691 2785 aaKnown RBP5.8□□□□□ -1.48
TCF4-228ENST00000565393 DOPEY1Q5JWR5 2465 aa5.8□□□□□ -1.48
TCF4-228ENST00000565393 A0A1W2PNV4 684 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 A0A1W2PRB8 838 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 OR2M5A3KFT3 312 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 FAM221AA4D161 298 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 SH3D21A4FU49 640 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 TMEM114B3SHH9 223 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 H0YC42 278 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 MSTNO14793 375 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 EMC8O43402 210 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 PEX11AO75192 247 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 SPAG7O75391 227 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 PLGP00747 810 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 IGKV1D-16P01601 117 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 RAF1P04049 648 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 CRHP06850 196 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 FGF4P08620 206 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 ALOX5P09917 674 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 POU2F1P14859 743 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 DDX5P17844 614 aaKnown RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 KLK2P20151 261 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 EFNA1P20827 205 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 TPD52P55327 224 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 CLDN20P56880 219 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 B3GALT5-AS1P59052 145 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 RPL38P63173 70 aaKnown RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 PRR5P85299 388 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 SORDQ00796 357 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 SLC18A2Q05940 514 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 EXOC3L2Q2M3D2 409 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 GRAMD1BQ3KR37 738 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 SPDYE7PQ495Y7 208 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 GLYR1Q49A26 553 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 ARL13AQ5H913 290 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 ANKRD34AQ69YU3 496 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 MYO7BQ6PIF6 2116 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 LRIG3Q6UXM1 1119 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 R3HCC1LQ7Z5L2 792 aaKnown RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 BTLAQ7Z6A9 289 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 ADGRE4PQ86SQ3 457 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 GALNT10Q86SR1 603 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 TGIF2LYQ8IUE0 185 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 HOMEZQ8IX15 550 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 FADS6Q8N9I5 356 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 CDRT4Q8N9R6 151 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 ZNF610Q8N9Z0 462 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 GATSQ8NAP1 163 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 OR2T11Q8NH01 316 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 PPP1R14CQ8TAE6 165 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 FBXO30Q8TB52 745 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.79□□□□□ -1.48
TCF4-228ENST00000565393 FIG4Q92562 907 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 JADE3Q92613 823 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 STARD4Q96DR4 205 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 C1GALT1C1Q96EU7 318 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 C16orf58Q96GQ5 468 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 ZNF845Q96IR2 970 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 WFIKKN1Q96NZ8 548 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 PRPF18Q99633 342 aaKnown RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 CCT7Q99832 543 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 TRMOQ9BU70 441 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 KLHL4Q9C0H6 718 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 OPN3Q9H1Y3 402 aaPredicted RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 TUBB1Q9H4B7 451 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 NEUROD4Q9HD90 331 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 FAM120CQ9NX05 1096 aaKnown RBP5.79□□□□□ -1.48
TCF4-228ENST00000565393 KLHL28Q9NXS3 571 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 ZNF226Q9NYT6 803 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 CLCF1Q9UBD9 225 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 VDAC3Q9Y277 283 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 DNAJC15Q9Y5T4 150 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 SNX8Q9Y5X2 465 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 AP4B1Q9Y6B7 739 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 CACNA1DQ01668 2161 aa5.79□□□□□ -1.48
TCF4-228ENST00000565393 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 TMEM233B4DJY2 109 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 B4DXG7 233 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 SHISA8B8ZZ34 492 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 C16orf97H3BN30 126 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 GTPBP1O00178 669 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 SCDO00767 359 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 EIF1AYO14602 144 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 PIP5K1BO14986 540 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 LSM1O15116 133 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 CFLARO15519 480 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 NPHS1O60500 1241 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 TNFSF13O75888 250 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 KCNK2O95069 426 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 NKX2-2O95096 273 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 SYNGR4O95473 234 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms