RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PRPS2P11908 318 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 LCN1P31025 176 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 ASMTP46597 345 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 AGFG1P52594 562 aaKnown RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 B3GALT5-AS1P59052 145 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 C17orf67Q0P5P2 114 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 FOXF2Q12947 444 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 ZCCHC12Q6PEW1 402 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 RIBC1Q8N443 379 aaPredicted RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 TBL1XR1Q9BZK7 514 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 REEP4Q9H6H4 257 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 EML4Q9HC35 981 aaKnown RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 ACSS1Q9NUB1 689 aaPredicted RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 CCM2LQ9NUG4 571 aaPredicted RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 GALNT8Q9NY28 637 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 NTMQ9P121 344 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 NDRG3Q9UGV2 375 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 RPH3AQ9Y2J0 694 aaPredicted RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 ZNF175Q9Y473 711 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 A0A1W2PNV4 684 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 SLC22A20A6NK97 555 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 HSPA4LO95757 839 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 NGFRP08138 427 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 HK1P19367 917 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 GABRA3P34903 492 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 GPC1P35052 558 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 FRKP42685 505 aaPredicted RBP13.56□□□□□ -0.24
SPG7-210ENST00000564409 PRR5P85299 388 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 RAET1LQ5VY80 246 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 CLEC6AQ6EIG7 209 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 PAMR1Q6UXH9 720 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 P4HA3Q7Z4N8 544 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 R3HCC1LQ7Z5L2 792 aaKnown RBP13.56□□□□□ -0.24
SPG7-210ENST00000564409 TGIF2LYQ8IUE0 185 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 C10orf107Q8IVU9 208 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
SPG7-210ENST00000564409 CDRT4Q8N9R6 151 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 DUSP19Q8WTR2 217 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 SMPDL3BQ92485 455 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 PPCDCQ96CD2 204 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 C1GALT1C1Q96EU7 318 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 EGLN2Q96KS0 407 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 YIPF4Q9BSR8 244 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 L2HGDHQ9H9P8 463 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 TNFRSF12AQ9NP84 129 aa13.56□□□□□ -0.24
SPG7-210ENST00000564409 MTORP42345 2549 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 SMIM23A6NLE4 172 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 CASKO14936 926 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 NPHS1O60500 1241 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 TNFSF13O75888 250 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 SOX30O94993 753 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 NKX2-2O95096 273 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 RAF1P04049 648 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 FCGR2AP12318 317 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 CD99P14209 185 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 RPL3P39023 403 aaKnown RBP13.55□□□□□ -0.24
SPG7-210ENST00000564409 MAP3K8P41279 467 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 MANFP55145 182 aaKnown RBP13.55□□□□□ -0.24
SPG7-210ENST00000564409 RPS3AP61247 264 aaKnown RBP13.55□□□□□ -0.24
SPG7-210ENST00000564409 PPP2R2AP63151 447 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 HSPB3Q12988 150 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 PDE7AQ13946 482 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 PCLAFQ15004 111 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 LRIG3Q6UXM1 1119 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 Q6ZSR9 355 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 ZNF551Q7Z340 670 aaPredicted RBP13.55□□□□□ -0.24
SPG7-210ENST00000564409 LUZP2Q86TE4 346 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 GCNT2Q8N0V5 402 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 LINC01560Q8TB33 94 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 EPS8L3Q8TE67 593 aaKnown RBP13.55□□□□□ -0.24
SPG7-210ENST00000564409 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 GATA5Q9BWX5 397 aaPredicted RBP13.55□□□□□ -0.24
SPG7-210ENST00000564409 MED11Q9P086 117 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 AP4B1Q9Y6B7 739 aa13.55□□□□□ -0.24
SPG7-210ENST00000564409 A0A087WZY1 265 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 OR2M5A3KFT3 312 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 SH3D21A4FU49 640 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 TMEM114B3SHH9 223 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 B4DXG7 233 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 ALG1L2C9J202 215 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 UTS2O95399 124 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 TGM6O95932 706 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 SDC1P18827 310 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 MAPK1P28482 360 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 SERPINB5P36952 375 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 MLC1Q15049 377 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPG7-210ENST00000564409 KANK2Q63ZY3 851 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 MARCH3Q86UD3 253 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 C4orf33Q8N1A6 199 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 NATD1Q8N6N6 113 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 GPR151Q8TDV0 419 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 GFM2Q969S9 779 aaKnown RBP13.54□□□□□ -0.24
SPG7-210ENST00000564409 APOPT1Q96IL0 206 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 MS4A4EQ96PG1 132 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms