RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 RPH3AQ9Y2J0 694 aaPredicted RBP11.85□□□□□ -0.51
AC009055.1-201ENST00000562656 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 MSTNO14793 375 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 PDPK1O15530 556 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 TNFRSF21O75509 655 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 TNFSF13O75888 250 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 NKX2-2O95096 273 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 DDX5P17844 614 aaKnown RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 HK1P19367 917 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 GABRA3P34903 492 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 FRKP42685 505 aaPredicted RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 CPA2P48052 419 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 PRR5P85299 388 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 PCLAFQ15004 111 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 KANK2Q63ZY3 851 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 PAMR1Q6UXH9 720 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 P4HA3Q7Z4N8 544 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 C10orf107Q8IVU9 208 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 CDRT4Q8N9R6 151 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 LINC01560Q8TB33 94 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 EPS8L3Q8TE67 593 aaKnown RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 DUSP19Q8WTR2 217 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 PPCDCQ96CD2 204 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 MTERF3Q96E29 417 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 C1GALT1C1Q96EU7 318 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 ALPK1Q96QP1 1244 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 PIGQQ9BRB3 760 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 GATA5Q9BWX5 397 aaPredicted RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 C12orf65Q9H3J6 166 aaKnown RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 LIME1Q9H400 295 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 REEP4Q9H6H4 257 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 ACSS1Q9NUB1 689 aaPredicted RBP11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 GALNT8Q9NY28 637 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 MED11Q9P086 117 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
AC009055.1-201ENST00000562656 A0A1W2PNV4 684 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 SLC22A20A6NK97 555 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 SMIM23A6NLE4 172 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 NPHS1O60500 1241 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 TGM6O95932 706 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 NGFRP08138 427 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 SDC1P18827 310 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 LCN1P31025 176 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 GPC1P35052 558 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 ASMTP46597 345 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 HSPB3Q12988 150 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 PDE7AQ13946 482 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 FGFBP1Q14512 234 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 RFTN2Q52LD8 501 aaPredicted RBP11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 RAET1LQ5VY80 246 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 FBXW10Q5XX13 1052 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 ZCCHC12Q6PEW1 402 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 LRIG3Q6UXM1 1119 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 ZNF551Q7Z340 670 aaPredicted RBP11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 R3HCC1LQ7Z5L2 792 aaKnown RBP11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 LUZP2Q86TE4 346 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 GCNT2Q8N0V5 402 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 OR2T11Q8NH01 316 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 SMPDL3BQ92485 455 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 YIPF4Q9BSR8 244 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 TBL1XR1Q9BZK7 514 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 RTN4RQ9BZR6 473 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 TUBB1Q9H4B7 451 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 EML4Q9HC35 981 aaKnown RBP11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 FLRT3Q9NZU0 649 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 STOML1Q9UBI4 398 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 NDRG3Q9UGV2 375 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 ZNF337Q9Y3M9 751 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 ZNF175Q9Y473 711 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 DNAJC15Q9Y5T4 150 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 AP4B1Q9Y6B7 739 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 AKAP6Q13023 2319 aa11.83□□□□□ -0.52
AC009055.1-201ENST00000562656 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 OR2M5A3KFT3 312 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 SH3D21A4FU49 640 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 C17orf51A8MQB3 221 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 ALG1L2C9J202 215 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 LSM1O15116 133 aaKnown RBP11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 UTS2O95399 124 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 HSPA4LO95757 839 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 ANGPTL1O95841 491 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 RAF1P04049 648 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 NUDT17P0C025 328 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 CD99P14209 185 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 RPL3P39023 403 aaKnown RBP11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 MANFP55145 182 aaKnown RBP11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 CLDN15P56746 228 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 RPS3AP61247 264 aaKnown RBP11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 STX5Q13190 355 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 MLC1Q15049 377 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 TMEM44Q2T9K0 475 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 MARCH3Q86UD3 253 aa11.82□□□□□ -0.52
AC009055.1-201ENST00000562656 TRABD2AQ86V40 505 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms