RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 FAM118AQ9NWS6 357 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SOHLH2Q9NX45 425 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 TRPC4Q9UBN4 977 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 BAG5Q9UL15 447 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SLC6A14Q9UN76 642 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 LIPT1Q9Y234 373 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SAMHD1Q9Y3Z3 626 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 U3KQV3 271 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SPACA6W5XKT8 324 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 COL27A1Q8IZC6 1860 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 NINQ8N4C6 2090 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 NUP210LQ5VU65 1888 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 DMDP11532 3685 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 IGKV3D-11A0A0A0MRZ8 115 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CENPVL1A0A0U1RR11 272 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SYNDIG1LA6NDD5 238 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ARRDC5A6NEK1 342 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 OR2W5A6NFC9 320 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 TRIM64BA6NI03 449 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 TMEM150CB9EJG8 249 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 C5orf58C9J3I9 102 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 HRKO00198 91 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 TNFRSF11BO00300 401 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SYT5O00445 386 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 GNGT2O14610 69 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PCDH17O14917 1159 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 FCMRO60667 390 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 TPST2O60704 377 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 JRKO75564 520 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 NKX2-2O95096 273 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ONECUT2O95948 504 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 TFAP2AP05549 437 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 GUSBP08236 651 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PABPC4LP0CB38 370 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ITGA2P17301 1181 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 NT5EP21589 574 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CBLP22681 906 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PPP2R1BP30154 601 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PLA2G5P39877 138 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 YAP1P46937 504 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CLK3P49761 638 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SEPHS1P49903 392 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 EMDP50402 254 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PDX1P52945 283 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CRISP3P54108 245 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 HSD17B7P56937 341 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CCL7P80098 99 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PLAURQ03405 335 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 FUT7Q11130 342 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ERV3-1Q14264 604 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 EXOSC7Q15024 291 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 EXOC3L2Q2M3D2 409 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 RFX4Q33E94 735 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PRAMEF17Q5VTA0 474 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 FOXB2Q5VYV0 432 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 TYW3Q6IPR3 259 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 DBX2Q6ZNG2 339 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PRR23CQ6ZRP0 262 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CCDC71Q8IV32 467 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SLC44A2Q8IWA5 706 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ST13P4Q8IZP2 240 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SLC5A8Q8N695 610 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF615Q8N8J6 731 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SUMF1Q8NBK3 374 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PIK3C3Q8NEB9 887 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 OR51Q1Q8NH59 317 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CEP76Q8TAP6 659 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CYGBQ8WWM9 190 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 HDAC2Q92769 488 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 CDS1Q92903 461 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 MVB12AQ96EY5 273 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PEX11GQ96HA9 241 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 AHCYL2Q96HN2 611 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SGCZQ96LD1 299 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 VSTM2LQ96N03 204 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 MUS81Q96NY9 551 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF607Q96SK3 696 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 STACQ99469 402 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SDF2Q99470 211 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PITX2Q99697 317 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 NUDT16L1Q9BRJ7 211 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 LMF2Q9BU23 707 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 EDEM2Q9BV94 578 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PINK1Q9BXM7 581 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 GABARAPL3Q9BY60 117 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF350Q9GZX5 532 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 GAREM1Q9H706 876 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 REEP1Q9H902 201 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 EQTNQ9NQ60 294 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 NECTIN3Q9NQS3 549 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PRTFDC1Q9NRG1 225 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 DUSP22Q9NRW4 184 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SLC22A11Q9NSA0 550 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PNPLA3Q9NST1 481 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 MAN2C1Q9NTJ4 1040 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 DDX18Q9NVP1 670 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 RLIMQ9NVW2 624 aa6.07□□□□□ -1.44
CAPN3-210ENST00000561817 SIDT1Q9NXL6 827 aaKnown RBP6.07□□□□□ -1.44
CAPN3-210ENST00000561817 PDP1Q9P0J1 537 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms