RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FBXW4P57775 412 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 EMX2Q04743 252 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 KPNB1Q14974 876 aaKnown RBP12.4□□□□□ -0.42
SMAD3-214ENST00000560402 NSUN5P2Q63ZY6 315 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 REP15Q6BDI9 236 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 SEM1Q6ZVN7 128 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 ZZZ3Q8IYH5 903 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 VWA5B2Q8N398 1253 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 FAM222BQ8WU58 562 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 ADIPOR1Q96A54 375 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 RMND5BQ96G75 393 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-214ENST00000560402 C3orf30Q96M34 536 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
SMAD3-214ENST00000560402 TUBB1Q9H4B7 451 aa12.4□□□□□ -0.42
SMAD3-214ENST00000560402 NF1P21359 2839 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 CD8B2A6NJW9 211 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 MANBAO00462 879 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 PGRMC2O15173 223 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ACOX3O15254 700 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 SLC22A3O75751 556 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 TRAPPC6AO75865 159 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 GBAP04062 536 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ATP1B1P05026 303 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 CT62P0C5K7 136 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 BMP5P22003 454 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 GPX3P22352 226 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ABCD3P28288 659 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 UQCRC1P31930 480 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 CASP3P42574 277 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 XKP51811 444 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 NEK2P51955 445 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 MAPK12P53778 367 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 IST1P53990 364 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ACTR3P61158 418 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 SORDQ00796 357 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 KRTAP21-3Q3LHN1 58 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 SPATS1Q496A3 300 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 VASNQ6EMK4 673 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 SLC48A1Q6P1K1 146 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 AAGABQ6PD74 315 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ARPINQ7Z6K5 226 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 METTL4Q8N3J2 472 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 FBXO27Q8NI29 283 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 DOK4Q8TEW6 326 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ANKRD27Q96NW4 1050 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 TIMP4Q99727 224 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-214ENST00000560402 GPATCH1Q9BRR8 931 aaKnown RBP12.39□□□□□ -0.43
SMAD3-214ENST00000560402 BRINP2Q9C0B6 783 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 CLEC4MQ9H2X3 399 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-214ENST00000560402 METTL7AQ9H8H3 244 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 BRF2Q9HAW0 419 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 CRIM1Q9NZV1 1036 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 SLC7A8Q9UHI5 535 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 ST6GALNAC2Q9UJ37 374 aa12.39□□□□□ -0.43
SMAD3-214ENST00000560402 HRNRQ86YZ3 2850 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 A0A1W2PS29 197 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 FAM234BA2RU67 622 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 MBD3L4A6NDZ8 208 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 MBD3L3A6NE82 208 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 MBD3L5A6NJ08 208 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 A6NNC1 897 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 WASHC1A8K0Z3 465 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 CFLARO15519 480 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 PPM1BO75688 479 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 PSMG1O95456 288 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 KLK1P06870 262 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 ALDOCP09972 364 aaKnown RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 ME2P23368 584 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 PSME3P61289 254 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 DCAF7P61962 342 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 SNTA1Q13424 505 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 RCAN2Q14206 197 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 SAMD4BQ5PRF9 694 aaKnown RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 C6orf136Q5SQH8 315 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 CCNYL2Q5T2Q4 361 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 FNDC7Q5VTL7 733 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 BICRALQ6AI39 1079 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 SLC30A6Q6NXT4 461 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 SCIMPQ6UWF3 145 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 COMMD6Q7Z4G1 85 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 KIF18BQ86Y91 864 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 NAXEQ8NCW5 288 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 MBD3L2Q8NHZ7 208 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 SELENOMQ8WWX9 145 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 NTNG2Q96CW9 530 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 FAIM2Q9BWQ8 316 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 OSBPL11Q9BXB4 747 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 TRIM15Q9C019 465 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 NXF5Q9H1B4 397 aaKnown RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 VCX3BQ9H321 246 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 SPAG4Q9NPE6 437 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 NMRK1Q9NWW6 199 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 LEF1Q9UJU2 399 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms