RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ARL8BQ9NVJ2 186 aa19.96■□□□□ 0.79
SNX1-210ENST00000560260 CNIH4Q9P003 139 aa19.96■□□□□ 0.79
SNX1-210ENST00000560260 ANAPC2Q9UJX6 822 aa19.96■□□□□ 0.79
SNX1-210ENST00000560260 FADS1O60427 444 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 UTS2O95399 124 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 CNR1P21554 472 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 PRDX6P30041 224 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 RFC3P40938 356 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 CRATP43155 626 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 MTPNP58546 118 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 DSTNP60981 165 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 STX5Q13190 355 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 INPP5JQ15735 1006 aaPredicted RBP19.95■□□□□ 0.78
SNX1-210ENST00000560260 SYPL1Q16563 259 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 ARHGAP11BQ3KRB8 267 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 APOOLQ6UXV4 268 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 OSBPL11Q9BXB4 747 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 ANGPTL4Q9BY76 406 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 ZNF350Q9GZX5 532 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 METTL7AQ9H8H3 244 aa19.95■□□□□ 0.78
SNX1-210ENST00000560260 TUBA8Q9NY65 449 aaPredicted RBP19.95■□□□□ 0.78
SNX1-210ENST00000560260 MRTO4Q9UKD2 239 aaKnown RBP19.95■□□□□ 0.78
SNX1-210ENST00000560260 CENPVL1A0A0U1RR11 272 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 ANKRD33BA6NCL7 494 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 LRRC3CA6NJW4 275 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 B4DXG7 233 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 FCMRO60667 390 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 TNFRSF21O75509 655 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 CHRM4P08173 479 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 BMP2P12643 396 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 EVI2BP34910 448 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 MAGEA8P43361 318 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 CPA2P48052 419 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 GAS1P54826 345 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 PSMD4P55036 377 aaKnown RBP19.94■□□□□ 0.78
SNX1-210ENST00000560260 FOXO1Q12778 655 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 RNFT1Q5M7Z0 435 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 C16orf62Q7Z3J2 963 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 CISD2Q8N5K1 135 aaKnown RBP19.94■□□□□ 0.78
SNX1-210ENST00000560260 POGLUT1Q8NBL1 392 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 OR4C3Q8NH37 302 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 ROPN1LQ96C74 230 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 LRRC58Q96CX6 371 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 TMCO6Q96DC7 493 aa19.94■□□□□ 0.78
SNX1-210ENST00000560260 C2orf72A6NCS6 295 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 NPIPB9F8W1W9 429 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 AIM2O14862 343 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 TRIM3O75382 744 aaPredicted RBP19.93■□□□□ 0.78
SNX1-210ENST00000560260 SOX30O94993 753 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 OXSR1O95747 527 aaPredicted RBP19.93■□□□□ 0.78
SNX1-210ENST00000560260 AGR2O95994 175 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 AK1P00568 194 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 GPX2P18283 190 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 PPIBP23284 216 aaKnown RBP19.93■□□□□ 0.78
SNX1-210ENST00000560260 RPP38P78345 283 aaKnown RBP19.93■□□□□ 0.78
SNX1-210ENST00000560260 TXNL4AP83876 142 aaKnown RBP19.93■□□□□ 0.78
SNX1-210ENST00000560260 FADDQ13158 208 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 INAQ16352 499 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 RABL3Q5HYI8 236 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 ATAD3BQ5T9A4 648 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 FNDC7Q5VTL7 733 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 FRRS1Q6ZNA5 592 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 ZFP62Q8NB50 900 aaPredicted RBP19.93■□□□□ 0.78
SNX1-210ENST00000560260 FAM173AQ9BQD7 235 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 DOHHQ9BU89 302 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 RUBCNLQ9H714 662 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 EXD2Q9NVH0 621 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 KLRF1Q9NZS2 232 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 KCNE5Q9UJ90 142 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 PCDHGB3Q9Y5G1 929 aa19.93■□□□□ 0.78
SNX1-210ENST00000560260 SUV39H1O43463 412 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 SCO2O43819 266 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 HS6ST1O60243 411 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 WISP2O76076 250 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 RASAL1O95294 804 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 DCTP40126 519 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 RNF144AP50876 292 aaPredicted RBP19.92■□□□□ 0.78
SNX1-210ENST00000560260 ANXA11P50995 505 aaKnown RBP19.92■□□□□ 0.78
SNX1-210ENST00000560260 MLLT10P55197 1068 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 KCNJ2P63252 427 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 TBCELQ5QJ74 424 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 TYW3Q6IPR3 259 aaKnown RBP19.92■□□□□ 0.78
SNX1-210ENST00000560260 NANOGP8Q6NSW7 305 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 PCYOX1LQ8NBM8 494 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 MAL2Q969L2 176 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 SNRNP40Q96DI7 357 aaKnown RBP19.92■□□□□ 0.78
SNX1-210ENST00000560260 CMTM5Q96DZ9 223 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 G6PC3Q9BUM1 346 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 SLC38A1Q9H2H9 487 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 RAD21L1Q9H4I0 556 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 NANOGQ9H9S0 305 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 MKLN1Q9UL63 735 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 ABCG2Q9UNQ0 655 aa19.92■□□□□ 0.78
SNX1-210ENST00000560260 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.92■□□□□ 0.78
SNX1-210ENST00000560260 KLRC4-KLRK1H3BQV0 150 aa19.91■□□□□ 0.78
SNX1-210ENST00000560260 KIAA0513O60268 411 aa19.91■□□□□ 0.78
SNX1-210ENST00000560260 GLSO94925 669 aaPredicted RBP19.91■□□□□ 0.78
SNX1-210ENST00000560260 H6PDO95479 791 aa19.91■□□□□ 0.78
SNX1-210ENST00000560260 NGFRP08138 427 aa19.91■□□□□ 0.78
SNX1-210ENST00000560260 TFPTP0C1Z6 253 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms