RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-216ENST00000560243 FBXO34Q9NWN3 711 aa10.59□□□□□ -0.71
RABGGTA-216ENST00000560243 TAS2R10Q9NYW0 307 aa10.59□□□□□ -0.71
RABGGTA-216ENST00000560243 CAMK2AQ9UQM7 478 aa10.59□□□□□ -0.71
RABGGTA-216ENST00000560243 EIF3LQ9Y262 564 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-216ENST00000560243 SNX8Q9Y5X2 465 aa10.59□□□□□ -0.71
RABGGTA-216ENST00000560243 PDZD2O15018 2839 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 ZIC3O60481 467 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 UTS2O95399 124 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 HMGN2P05204 90 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 GABRA1P14867 456 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 PRPS1L1P21108 318 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 RPL3P39023 403 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 STARP49675 285 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 CLDN8P56748 225 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 TFF3Q07654 80 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 LASP1Q14847 261 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 MLC1Q15049 377 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 PGS1Q32NB8 556 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 GRAMD1BQ3KR37 738 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 CCNJQ5T5M9 372 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 FIGNL1Q6PIW4 674 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 PLXDC2Q6UX71 529 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 TRIM42Q8IWZ5 723 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 MCEMP1Q8IX19 187 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 FADS6Q8N9I5 356 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 CDRT4Q8N9R6 151 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 NAXEQ8NCW5 288 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 OR2M3Q8NG83 312 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 OR4C3Q8NH37 302 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 DUSP19Q8WTR2 217 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 ASB5Q8WWX0 329 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 OR5P2Q8WZ92 322 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 JADE3Q92613 823 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 DSN1Q9H410 356 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 ZCCHC3Q9NUD5 404 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 FAM120CQ9NX05 1096 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 ASIC5Q9NY37 505 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 NOP53Q9NZM5 478 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 MED11Q9P086 117 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 RPH3AQ9Y2J0 694 aaPredicted RBP10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 PCDHGB3Q9Y5G1 929 aa10.58□□□□□ -0.72
RABGGTA-216ENST00000560243 AHRRA9YTQ3 701 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 SDHDO14521 159 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ANKRD28O15084 1053 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 GMFGO60234 142 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 SNNO75324 88 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 KCNK2O95069 426 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 KCNH1O95259 989 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 EPPINO95925 133 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ACTL6AO96019 429 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 HOXD4P09016 255 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 COX6B1P14854 86 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 DPP4P27487 766 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 SRD5A2P31213 254 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 CCT3P49368 545 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 GFRA1P56159 465 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 C21orf58P58505 322 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 B3GALT5-AS1P59052 145 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 HBA1P69905 142 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 PHC1P78364 1004 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 SRYQ05066 204 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 OR4F3Q6IEY1 312 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 IFNEQ86WN2 208 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 CLECL1Q8IZS7 167 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 CLEC4FQ8N1N0 589 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ACBD4Q8NC06 268 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 TNIP2Q8NFZ5 429 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 OR4K17Q8NGC6 315 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 OR5M1Q8NGP8 315 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 OR5AK3PQ8NH89 298 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 PSMA8Q8TAA3 256 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 FAM110BQ8TC76 370 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 CDS1Q92903 461 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 DUSP26Q9BV47 211 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 TRIM8Q9BZR9 551 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 BHLHE41Q9C0J9 482 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 MEAF6Q9HAF1 191 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ATAD3AQ9NVI7 634 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 PPP4R1LQ9P1A2 415 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 MARCOQ9UEW3 520 aaPredicted RBP10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 DKKL1Q9UK85 242 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ABCG2Q9UNQ0 655 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 KCNE3Q9Y6H6 103 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
RABGGTA-216ENST00000560243 ANKHD1Q8IWZ3 2542 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 TTC36A6NLP5 189 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 CFLARO15519 480 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 SNUPNO95149 360 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 ALOX5P09917 674 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 ALDOCP09972 364 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 KITP10721 976 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 CPN1P15169 458 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 DDX5P17844 614 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 PTGER4P35408 488 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 ZFP36L2P47974 494 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 RNF144AP50876 292 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms