RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CROCCP2Q86T23 111 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 YRDCQ86U90 279 aaKnown RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 TRABD2AQ86V40 505 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 IFNEQ86WN2 208 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 RPRMLQ8N4K4 120 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 FAM83FQ8NEG4 500 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 OR7G2Q8NG99 324 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 OR4K17Q8NGC6 315 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 GFM2Q969S9 779 aaKnown RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 PPCDCQ96CD2 204 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 ELP4Q96EB1 424 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 SLC35A4Q96G79 324 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 DHRS1Q96LJ7 313 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 PPP3R2Q96LZ3 170 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 AMDHD1Q96NU7 426 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 NODALQ96S42 347 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF559Q9BR84 538 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 GATA5Q9BWX5 397 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 C12orf65Q9H3J6 166 aaKnown RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 REEP4Q9H6H4 257 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 FOLH1BQ9HBA9 442 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 MCCC2Q9HCC0 563 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 GALNT9Q9HCQ5 603 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 SERHLQ9NQF3 203 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 ATAD3AQ9NVI7 634 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 Q9UFV3 132 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 KCNN3Q9UGI6 736 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 DKKL1Q9UK85 242 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 CBLCQ9ULV8 474 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 C19orf53Q9UNZ5 99 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-222ENST00000556768 SLC6A5Q9Y345 797 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 FAM215AQ9Y5M1 114 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 FBN2P35556 2912 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 OTOGQ6ZRI0 2925 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 PCNX1Q96RV3 2341 aa6.68□□□□□ -1.34
SCFD1-222ENST00000556768 UPK1AO00322 258 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 RGS16O15492 202 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 SPAG7O75391 227 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 SOX30O94993 753 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 ZWINTO95229 277 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 MYZAPP0CAP1 466 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 NAT2P11245 290 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 HPGDP15428 266 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 CPEP16870 476 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 BMP7P18075 431 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 ENDOUP21128 410 aaKnown RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PTPN6P29350 595 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 ALDH3A1P30838 453 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 OPRM1P35372 400 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 RFX3P48380 749 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 DGKQP52824 942 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PRKAG1P54619 331 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 RPL38P63173 70 aaKnown RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 EEF1A1P68104 462 aaKnown RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PRR5P85299 388 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 DUSP2Q05923 314 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 CRYZQ08257 329 aaKnown RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 HSPB3Q12988 150 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PCLAFQ15004 111 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 ATP6AP1LQ52LC2 224 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 RFTN2Q52LD8 501 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 EIPR1Q53HC9 387 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 ARL13AQ5H913 290 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 EEF1A1P5Q5VTE0 462 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 FNDC7Q5VTL7 733 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 RTL6Q6ICC9 239 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 RNF165Q6ZSG1 346 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 KIF18BQ86Y91 864 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 NUDCD3Q8IVD9 361 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 KIRREL3Q8IZU9 778 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 OR2L13Q8N349 312 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 NATD1Q8N6N6 113 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 SIMC1Q8NDZ2 872 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.67□□□□□ -1.342e-17■■■■□ 19.6
SCFD1-222ENST00000556768 TCP10LQ8TDR4 215 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 GPR151Q8TDV0 419 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 TWIST2Q8WVJ9 160 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 HGDQ93099 445 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 CAVIN3Q969G5 261 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 EFHD2Q96C19 240 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 MTERF3Q96E29 417 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 LURAP1Q96LR2 239 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 TRIB1Q96RU8 372 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 TBL1XR1Q9BZK7 514 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 TRIM8Q9BZR9 551 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PRDM14Q9GZV8 571 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 CENPHQ9H3R5 247 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 GLIPR2Q9H4G4 154 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 ANKRA2Q9H9E1 313 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 CALHM2Q9HA72 323 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PPP4R1LQ9P1A2 415 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 LGALS13Q9UHV8 139 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 DNAJC15Q9Y5T4 150 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 WIF1Q9Y5W5 379 aa6.67□□□□□ -1.34
SCFD1-222ENST00000556768 MAP1AP78559 2803 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-222ENST00000556768 PRAMEF27A3QJZ7 478 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CD8B2A6NJW9 211 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 NPIPB8E9PQR5 432 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms