RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TRMT10AQ8TBZ6 339 aaKnown RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 RAET1EQ8TD07 263 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SPRYD4Q8WW59 207 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 CTNNBL1Q8WYA6 563 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ART4Q93070 314 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 MYLPFQ96A32 169 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 NABP1Q96AH0 204 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SLC45A3Q96JT2 553 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SLC30A2Q9BRI3 323 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 FEM1AQ9BSK4 669 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 TBC1D10AQ9BXI6 508 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ESM1Q9NQ30 184 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ABCC13Q9NSE7 274 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 NUDT4Q9NZJ9 180 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 TMEM181Q9P2C4 612 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 GALPQ9UBC7 116 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 MAB21L2Q9Y586 359 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 BAZ1AQ9NRL2 1556 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 SOGA1O94964 1423 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 NCOA1Q15788 1441 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 KIAA1107Q9UPP5 1409 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 KDRP35968 1356 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 KIF15Q9NS87 1388 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 IGLV4-3A0A075B6K6 122 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 KIF2AO00139 706 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 ATP8B1O43520 1251 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 TPST2O60704 377 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 STX11O75558 287 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 POP4O95707 220 aaKnown RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 MT-ND1P03886 318 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 CCDC159P0C7I6 412 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 RNF224P0DH78 156 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 NOVP48745 357 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 RGS4P49798 205 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 STK19P49842 368 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 METAP1P53582 386 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 LRRC74AQ0VAA2 488 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 PJVKQ0ZLH3 352 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 SELPLGQ14242 412 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 RAB35Q15286 201 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 UBE2V2Q15819 145 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 RABGAP1LQ5R372 815 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 PMF1Q6P1K2 205 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 PNCKQ6P2M8 343 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 DPY19L4Q7Z388 723 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 CCDC71Q8IV32 467 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 CCDC112Q8NEF3 446 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 LRRC15Q8TF66 581 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 GTF3AQ92664 365 aaKnown RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 SDSLQ96GA7 329 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 DHTKD1Q96HY7 919 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 AGAP3Q96P47 875 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 TESK2Q96S53 571 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 MCRIP2Q9BUT9 160 aaKnown RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 ST6GALNAC5Q9BVH7 336 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 PUS3Q9BZE2 481 aaKnown RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 COMMD4Q9H0A8 199 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 SUDS3Q9H7L9 328 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 CHRNA9Q9UGM1 479 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 MRPS33Q9Y291 106 aaKnown RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 EXOSC1Q9Y3B2 195 aaKnown RBP3.55□□□□□ -1.84
PRPF39-210ENST00000556718 WDR45Q9Y484 360 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 SPACA6W5XKT8 324 aa3.55□□□□□ -1.84
PRPF39-210ENST00000556718 TRBV7-9A0A0J9YWB2 115 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 TEX48A0A1B0GUV7 120 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 TRABD2BA6NFA1 517 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 PCP4L1A6NKN8 68 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 A8MXK9 166 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 K7EQG2 157 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 DUX1O43812 170 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 TYROBPO43914 113 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 SNAP91O60641 907 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 TM7SF2O76062 418 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 SNX4O95219 450 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 IGFBP1P08833 259 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-210ENST00000556718 HOXB7P09629 217 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 IQCF3P0C7M6 154 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 RPS2P15880 293 aaKnown RBP3.54□□□□□ -1.84
PRPF39-210ENST00000556718 AZU1P20160 251 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 U2AF2P26368 475 aaKnown RBP eCLIP3.54□□□□□ -1.84
PRPF39-210ENST00000556718 CA8P35219 290 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 MAGEA9P43362 315 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 PPT1P50897 306 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 MFAP2P55001 183 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 HAND2P61296 217 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 NTHL1P78549 312 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 CNTN2Q02246 1040 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 BDH1Q02338 343 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 MESDQ14696 234 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 MAPK6Q16659 721 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 LINC01620Q4KN68 170 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 ACER2Q5QJU3 275 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 FAM182AQ5T1J6 154 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 SEL1L3Q68CR1 1132 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 TMEM225Q6GV28 225 aa3.54□□□□□ -1.84
PRPF39-210ENST00000556718 ARMCX5Q6P1M9 558 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms