RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 INTS12Q96CB8 462 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 C1GALT1C1Q96EU7 318 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 PIGQQ9BRB3 760 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 LIME1Q9H400 295 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 LRTM1Q9HBL6 345 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 ACSS1Q9NUB1 689 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 ZNF175Q9Y473 711 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 FREM3P0C091 2139 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 SLC22A20A6NK97 555 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 AZIN1O14977 448 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 PDPK1O15530 556 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 SCO2O43819 266 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 NKX2-2O95096 273 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 KCNH1O95259 989 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 TGM6O95932 706 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 FGF4P08620 206 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 PRPS2P11908 318 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 CD99P14209 185 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 DDX5P17844 614 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 CPA2P48052 419 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 C17orf67Q0P5P2 114 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 TMEM44Q2T9K0 475 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 KRTAP21-3Q3LHN1 58 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 ZCCHC12Q6PEW1 402 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 Q6ZSR9 355 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 CHMP1BQ7LBR1 199 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 LUZP2Q86TE4 346 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 GCNT2Q8N0V5 402 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 RIBC1Q8N443 379 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 CDRT4Q8N9R6 151 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 CCDC63Q8NA47 563 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 CEP70Q8NHQ1 597 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 ZFP28Q8NHY6 868 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 LINC01560Q8TB33 94 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 MTERF3Q96E29 417 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 ZBED6CLQ96FA7 236 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 EGLN2Q96KS0 407 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 DSN1Q9H410 356 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 REEP4Q9H6H4 257 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 RNF122Q9H9V4 155 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 NDRG3Q9UGV2 375 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 DOCK7Q96N67 2140 aa11.47□□□□□ -0.57
HNRNPC-221ENST00000555883 MED13LQ71F56 2210 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 SH3D21A4FU49 640 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 ALG1L2C9J202 215 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 LSM1O15116 133 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 TRIM13O60858 407 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 ATE1O95260 518 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 HSPA4LO95757 839 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 CHEK2O96017 543 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 HRGP04196 525 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 FCGR2AP12318 317 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 FOSL1P15407 271 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 ZNF17P17021 662 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 SDC1P18827 310 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 HK1P19367 917 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 ASMTP46597 345 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 CLDN15P56746 228 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 PCLAFQ15004 111 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 MLC1Q15049 377 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 SH2D4BQ5SQS7 431 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 RAET1LQ5VY80 246 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 FBXW10Q5XX13 1052 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 KANK2Q63ZY3 851 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 CLEC6AQ6EIG7 209 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 C10orf107Q8IVU9 208 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 GSPT2Q8IYD1 628 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 METTL25Q8N6Q8 603 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 TBL1XR1Q9BZK7 514 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 RTN4RQ9BZR6 473 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 L2HGDHQ9H9P8 463 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 PAQR5Q9NXK6 330 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 PLEKHA6Q9Y2H5 1048 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 TESMINQ9Y4I5 508 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 DNAJC15Q9Y5T4 150 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 AP4B1Q9Y6B7 739 aa11.46□□□□□ -0.57
HNRNPC-221ENST00000555883 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 A0A087WZY1 265 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 OR2M5A3KFT3 312 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 C7orf72A4D263 438 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 EMC8O43402 210 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 NPHS1O60500 1241 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 UTS2O95399 124 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 ANGPTL1O95841 491 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 CD8BP10966 210 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 KLK2P20151 261 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 GABRA3P34903 492 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 SERPINB5P36952 375 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 PPP2R2AP63151 447 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 HSPB3Q12988 150 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 GUSBP1Q15486 140 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 DEFB113Q30KQ7 82 aa11.45□□□□□ -0.58
HNRNPC-221ENST00000555883 RFTN2Q52LD8 501 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms