RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NTMT1Q9BV86 223 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 SUDS3Q9H7L9 328 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 MARCH7Q9H992 704 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 HPS4Q9NQG7 708 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 ACOXLQ9NUZ1 547 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 NARFQ9UHQ1 456 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 PLEKHG2Q9H7P9 1386 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 NPC1L1Q9UHC9 1359 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 TNIKQ9UKE5 1360 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 FAM240BA0A1B0GVZ2 78 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 BCLAF3A2AJT9 711 aaKnown RBP3.97□□□□□ -1.77
SCFD1-211ENST00000554437 OR52A4PA6NMU1 304 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 KIAA0513O60268 411 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 SH3BGRLO75368 114 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 E2F6O75461 281 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 SRSF10O75494 262 aaKnown RBP3.97□□□□□ -1.77
SCFD1-211ENST00000554437 STAMBPO95630 424 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 NPPAP01160 153 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 EPOP01588 193 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 FHP07954 510 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 CYP3A5P20815 502 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 DPP4P27487 766 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 CA8P35219 290 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 RFC2P35250 354 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 SPRP35270 261 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-211ENST00000554437 TNFRSF4P43489 277 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 RGS4P49798 205 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 CSRP3P50461 194 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 KCNK10P57789 538 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 MAP2K1Q02750 393 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-211ENST00000554437 SSX2Q16385 188 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 BCL7AQ4VC05 210 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 EIPR1Q53HC9 387 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 TAF3Q5VWG9 929 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 NKAIN2Q5VXU1 208 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 LEMD1Q68G75 181 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 BIVMQ86UB2 503 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 HPS6Q86YV9 775 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 SPAG16Q8N0X2 631 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 RAB3IL1Q8TBN0 382 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 DNAJA4Q8WW22 397 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-211ENST00000554437 PCED1BQ96HM7 432 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 HAUS4Q9H6D7 363 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 GPR83Q9NYM4 423 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 RNF14Q9UBS8 474 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 CRLS1Q9UJA2 301 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 CPQQ9Y646 472 aa3.97□□□□□ -1.77
SCFD1-211ENST00000554437 FER1L5A0AVI2 2057 aa3.96□□□□□ -1.77
SCFD1-211ENST00000554437 TEX48A0A1B0GUV7 120 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF724A8MTY0 619 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 MEI4A8MW99 385 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 GOLGA8SH3BPF8 625 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 BCL2L11O43521 198 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SDC3O75056 442 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SYNGR4O95473 234 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 CPNE6O95741 557 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 MBD3O95983 291 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 RENP00797 406 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SERPINF2P08697 491 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 UBTFL6P0CB48 400 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 GP9P14770 177 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 B4GALT1P15291 398 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 BCL3P20749 454 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 GPX3P22352 226 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 BMI1P35226 326 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 NUP62P37198 522 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 PTGFRP43088 359 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 MAGEA1P43355 309 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 TNFSF10P50591 281 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 HADHBP55084 474 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 CNTN2Q02246 1040 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 MFGE8Q08431 387 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 PEX6Q13608 980 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 TATDN3Q17R31 274 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 EXOC3L2Q2M3D2 409 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 AGKQ53H12 422 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SEL1L3Q68CR1 1132 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 BLOC1S2Q6QNY1 142 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 NUFIP2Q7Z417 695 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 C17orf64Q86WR6 236 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 LRRC49Q8IUZ0 686 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SPEM1Q8N4L4 309 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 ZNF781Q8N8C0 355 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SPERTQ8NA61 448 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 TRMT10AQ8TBZ6 339 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 PNPT1Q8TCS8 783 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SLC2A14Q8TDB8 520 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 GIPC3Q8TF64 312 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 UBTD2Q8WUN7 234 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 MRPL24Q96A35 216 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 PINX1Q96BK5 328 aaKnown RBP3.96□□□□□ -1.78
SCFD1-211ENST00000554437 C19orf60Q96EN9 201 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 IFT74Q96LB3 600 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 GPR137Q96N19 417 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 RAB40CQ96S21 281 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 HSD17B14Q9BPX1 270 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 CBWD1Q9BRT8 395 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 APMAPQ9HDC9 416 aa3.96□□□□□ -1.78
SCFD1-211ENST00000554437 SLC7A10Q9NS82 523 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms