RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CHCHD2Q9Y6H1 151 aaPredicted RBP2.85□□□□□ -1.95
SLIRP-202ENST00000553981 DSCAMO60469 2012 aa2.85□□□□□ -1.95
SLIRP-202ENST00000553981 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 A0A096LNT2 108 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TRGV5A0A0B4J1U4 118 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TRBC2A0A5B9 178 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 MBD3L3A6NE82 208 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 A8MVJ9 347 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 BTNL10A8MVZ5 291 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ALG1L2C9J202 215 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 AKR1B15C9JRZ8 316 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 H0YC42 278 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 KLRC4-KLRK1H3BQV0 150 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 M0R3H8 397 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CDC7O00311 574 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PRPF4O43172 522 aaKnown RBP eCLIP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PSMD3O43242 534 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 FGF17O60258 216 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 GPRIN2O60269 458 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 NDUFS7O75251 213 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SH3BGRLO75368 114 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TRIM3O75382 744 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CRLF1O75462 422 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TNFSF13O75888 250 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PIAS1O75925 651 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SNUPNO95149 360 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 IL33O95760 270 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TGM6O95932 706 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 MBD3O95983 291 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CATP04040 527 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 RPN2P04844 631 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SERPIND1P05546 499 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 APRTP07741 180 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CYC1P08574 325 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 OGNP20774 298 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 FDFT1P37268 417 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TNNT3P45378 269 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TTPAP49638 278 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 STARP49675 285 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ASCL1P50553 236 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SSR4P51571 173 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 NAGLUP54802 743 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TPD52P55327 224 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 RAB38P57729 211 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 RPS13P62277 151 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 BTN3A2P78410 334 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PLGLB1Q02325 96 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TNK1Q13470 666 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TRIM14Q14142 442 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 KEAP1Q14145 624 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TMED2Q15363 201 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PPP1R3AQ16821 1122 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SLC25A35Q3KQZ1 300 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 KRTAP24-1Q3LI83 254 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ADPRMQ3LIE5 342 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PLA1AQ53H76 456 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ODF2Q5BJF6 829 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PIGGQ5H8A4 983 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TOR1AIP1Q5JTV8 583 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 C10orf62Q5T681 223 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CCDC181Q5TID7 509 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ZNF474Q6S9Z5 364 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 DCDC5Q6ZRR9 648 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ZNF550Q7Z398 422 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 LINC00523Q86TU6 105 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 LRRC6Q86X45 466 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 LRRC25Q8N386 305 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TMEM156Q8N614 296 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ZNF441Q8N8Z8 693 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CAMKVQ8NCB2 501 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PPHLN1Q8NEY8 458 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 MBD3L2Q8NHZ7 208 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SLC2A12Q8TD20 617 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PAQR8Q8TEZ7 354 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 FAM222BQ8WU58 562 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 NEUROG1Q92886 237 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PEX13Q92968 403 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 VMP1Q96GC9 406 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 VPS50Q96JG6 964 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 NPAS1Q99742 590 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 MAPKAP1Q9BPZ7 522 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 KLHDC3Q9BQ90 382 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TUBA1CQ9BQE3 449 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 FERMT1Q9BQL6 677 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 ZNF717Q9BY31 904 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 UGT2B28Q9BY64 529 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 RTN4RQ9BZR6 473 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 NAT10Q9H0A0 1025 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 CCDC177Q9NQR7 707 aaPredicted RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PRTFDC1Q9NRG1 225 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SMYD2Q9NRG4 433 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 HPF1Q9NWY4 346 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 TEKT2Q9UIF3 430 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 DAPP1Q9UN19 280 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SLC22A14Q9Y267 594 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 YARS2Q9Y2Z4 477 aaKnown RBP2.84□□□□□ -1.95
SLIRP-202ENST00000553981 SPEF1Q9Y4P9 236 aa2.84□□□□□ -1.95
SLIRP-202ENST00000553981 PRRC2CQ9Y520 2896 aaKnown RBP2.84□□□□□ -1.96
SLIRP-202ENST00000553981 CMYA5Q8N3K9 4069 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms