RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 REM1O75628 298 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 GPIP06744 558 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 UMPSP11172 480 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 HPGDP15428 266 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 PSMA4P25789 261 aaKnown RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 CLK3P49761 638 aaKnown RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 MLF1P58340 268 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 ACTR3P61158 418 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 ABHD17BQ5VST6 288 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 TYW3Q6IPR3 259 aaKnown RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 ARMC8Q8IUR7 673 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 APLFQ8IW19 511 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 CMIPQ8IY22 773 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 GALNT16Q8N428 558 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 BRIX1Q8TDN6 353 aaKnown RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 TTC9Q92623 222 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 STMN2Q93045 179 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 TMCO6Q96DC7 493 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 SPACA9Q96E40 222 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 COL21A1Q96P44 957 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 RASL10BQ96S79 203 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 SECISBP2Q96T21 854 aaKnown RBP13.38□□□□□ -0.27
SHMT2-210ENST00000553950 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 UBQLN4Q9NRR5 601 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 KLHL28Q9NXS3 571 aa13.38□□□□□ -0.27
SHMT2-210ENST00000553950 AGAP5A6NIR3 686 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 H3BNH8 94 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 WWP2O00308 870 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 SYT5O00445 386 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 NKX2-8O15522 239 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 SUV39H1O43463 412 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 TSPAN2O60636 221 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 OR2J2O76002 312 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 NADKO95544 446 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 SERPINA1P01009 418 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 FBXO45P0C2W1 286 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 PABPC4LP0CB38 370 aaKnown RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 NCK1P16333 377 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 RPS4Y1P22090 263 aaKnown RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 AQP1P29972 269 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 PRKAR1BP31321 381 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 DCTP40126 519 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 RFX3P48380 749 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 ATP12AP54707 1039 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 GPR68Q15743 365 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 RPS26P11Q5JNZ5 115 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 CCNJQ5T5M9 372 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 RNF220Q5VTB9 566 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 ZFP1Q6P2D0 407 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 CBLL1Q75N03 491 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 SPATA24Q86W54 205 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 MISPQ8IVT2 679 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 TMEM156Q8N614 296 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 THAP3Q8WTV1 239 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 WDR60Q8WVS4 1066 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 PROX1Q92786 737 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 UGT2B28Q9BY64 529 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 ING2Q9H160 280 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 MAGIXQ9H6Y5 334 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 YY1AP1Q9H869 796 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 DCAF13Q9NV06 445 aaKnown RBP13.37□□□□□ -0.27
SHMT2-210ENST00000553950 USP22Q9UPT9 525 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 KCNE3Q9Y6H6 103 aa13.37□□□□□ -0.27
SHMT2-210ENST00000553950 A0A1W2PQD3 144 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 PRAMEF27A3QJZ7 478 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 TMEM200CA6NKL6 621 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 A8MUI8 341 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 NME6O75414 186 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 C8BP07358 591 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 CELA2AP08217 269 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 NID1P14543 1247 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 IL7RP16871 459 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 SOX11P35716 441 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 MS4A2Q01362 244 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 CHRNEQ04844 493 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 Q0VFX4 171 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 MAPK11Q15759 364 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ZNF141Q15928 474 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 NTRK2Q16620 822 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 FAM98BQ52LJ0 330 aaKnown RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 CYBRD1Q53TN4 286 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 AGAP7PQ5VUJ5 663 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 TMEM81Q6P7N7 255 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 DHRS4L2Q6PKH6 230 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 OR4N2Q8NGD1 307 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 OR52P1PQ8NH57 321 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 GEMIN6Q8WXD5 167 aaKnown RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 SLC35B4Q969S0 331 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 EFHD2Q96C19 240 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 SGCZQ96LD1 299 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 AGAP4Q96P64 663 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms