RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 COQ7Q99807 217 aa2.14□□□□□ -2.07
VRK1-202ENST00000553683 NICN1Q9BSH3 213 aa2.14□□□□□ -2.07
VRK1-202ENST00000553683 DDX47Q9H0S4 455 aaKnown RBP2.14□□□□□ -2.07
VRK1-202ENST00000553683 RPAP3Q9H6T3 665 aaPredicted RBP2.14□□□□□ -2.07
VRK1-202ENST00000553683 DUS2Q9NX74 493 aaKnown RBP2.14□□□□□ -2.07
VRK1-202ENST00000553683 SAMD4AQ9UPU9 718 aaKnown RBP2.14□□□□□ -2.07
VRK1-202ENST00000553683 TEX264Q9Y6I9 313 aa2.14□□□□□ -2.07
VRK1-202ENST00000553683 SLCO1B1Q9Y6L6 691 aa2.14□□□□□ -2.07
VRK1-202ENST00000553683 CHD4Q14839 1912 aa2.14□□□□□ -2.07
VRK1-202ENST00000553683 HECW2Q9P2P5 1572 aa2.14□□□□□ -2.07
VRK1-202ENST00000553683 ANKRD30BQ9BXX2 1392 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 DHRS7CA6NNS2 312 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 E9PLD3 99 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 K7ENP7 123 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 BBOX1O75936 387 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 PGK2P07205 417 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 CD55P08174 381 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 CCDC166P0CW27 439 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 VDRP11473 427 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 BCKDHAP12694 445 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 ZNF17P17021 662 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 RPL4P36578 427 aaKnown RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 RAG2P55895 527 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 RND3P61587 244 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 IRX3P78415 501 aaPredicted RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 GALK2Q01415 458 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 MECOMQ03112 1051 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 ZKSCAN8Q15776 578 aaPredicted RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 ZNF658BQ4V348 819 aaPredicted RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 AGKQ53H12 422 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 TEX44Q53QW1 395 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 HSP90AB3PQ58FF7 597 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 BEND6Q5SZJ8 279 aaPredicted RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 SULT1C3Q6IMI6 304 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 ZNF562Q6V9R5 426 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 FRA10AC1Q70Z53 315 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 P4HA3Q7Z4N8 544 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 MKXQ8IYA7 352 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 CCDC71LQ8N9Z2 235 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 TMEM185AQ8NFB2 350 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 NEK11Q8NG66 645 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 ANKRD49Q8WVL7 239 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 SNX21Q969T3 373 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 SLC25A36Q96CQ1 311 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 ZNF184Q99676 751 aaPredicted RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 FEM1AQ9BSK4 669 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 ATG10Q9H0Y0 220 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 TNMDQ9H2S6 317 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 RBM28Q9NW13 759 aaKnown RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 GHRLQ9UBU3 117 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 KCNN3Q9UGI6 736 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 APPL1Q9UKG1 709 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 CENPJQ9HC77 1338 aaPredicted RBP2.13□□□□□ -2.07
VRK1-202ENST00000553683 SYNRGQ9UMZ2 1314 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 NACAE9PAV3 2078 aa2.13□□□□□ -2.07
VRK1-202ENST00000553683 METP08581 1390 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 IGHV7-81A0A0B4J1V7 117 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 BICDL2A1A5D9 508 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 SLC9B1P1A6NJY1 282 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 IMPA2O14732 288 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 ALOX15BO15296 676 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 TBL1XO60907 577 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 TRIM3O75382 744 aaPredicted RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 IGKV3-11P04433 115 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 H2AFXP16104 143 aaPredicted RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 GCFC2P16383 781 aaKnown RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 PTPN6P29350 595 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 RFC2P35250 354 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 TDO2P48775 406 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 MYBPC1Q00872 1141 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 MAP2K1Q02750 393 aaPredicted RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 SRYQ05066 204 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 DPYSQ14117 519 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 BTG3Q14201 252 aaPredicted RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 CARTPTQ16568 116 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 LRRC36Q1X8D7 754 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 SERPINA9Q86WD7 417 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 IFNEQ86WN2 208 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 C17orf82Q86X59 251 aaPredicted RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 TGIF2LYQ8IUE0 185 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 SFRP1Q8N474 314 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 EXOC6Q8TAG9 804 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 IL1F10Q8WWZ1 152 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 ANP32BQ92688 251 aaKnown RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 IL4I1Q96RQ9 567 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 CNPY3Q9BT09 278 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 CCSER1Q9C0I3 900 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 PNO1Q9NRX1 252 aaKnown RBP2.12□□□□□ -2.07
VRK1-202ENST00000553683 ONECUT1Q9UBC0 465 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 DNPEPQ9ULA0 475 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 RAB26Q9ULW5 256 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 DUSP12Q9UNI6 340 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 GMPPBQ9Y5P6 360 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 ASTN1O14525 1302 aa2.12□□□□□ -2.07
VRK1-202ENST00000553683 ARID1AO14497 2285 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 RIMBP3CA6NJZ7 1639 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 RIMBP3BA6NNM3 1639 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 RIMBP3Q9UFD9 1639 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 A0A0U1RRA0 63 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 TTC26A0AVF1 554 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms