RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ZNF607Q96SK3 696 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CSF3RQ99062 836 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 STACQ99469 402 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CTRCQ99895 268 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CPPED1Q9BRF8 314 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 GPR87Q9BY21 358 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PIGUQ9H490 435 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ARMC7Q9H6L4 198 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CXorf36Q9H7Y0 433 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 DCLRE1BQ9H816 532 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 EVA1AQ9H8M9 152 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 POLR1BQ9H9Y6 1135 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CXorf21Q9HAI6 301 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ADAP2Q9NPF8 381 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 NECTIN3Q9NQS3 549 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SIRT3Q9NTG7 399 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ADPRHL2Q9NX46 363 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SLC25A37Q9NYZ2 338 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 P2RX2Q9UBL9 471 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 COPS7AQ9UBW8 275 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SLC7A8Q9UHI5 535 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 KCND3Q9UK17 655 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SAMD4AQ9UPU9 718 aaKnown RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ANGPT4Q9Y264 503 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SNX13Q9Y5W8 968 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 B3GALT1Q9Y5Z6 326 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CCDC88CQ9P219 2028 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 KIF26BQ2KJY2 2108 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CACNA1HO95180 2353 aa4.65□□□□□ -1.66
VTI1B-202ENST00000553619 IGKV3D-11A0A0A0MRZ8 115 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 A0A0G2JPF8 293 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SPAARA0A1B0GVQ0 90 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 TCRBV16S1A1N1A0A5B0 115 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 C17orf105B2RV13 164 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HNRNPCL2B2RXH8 293 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 IDSB3KWA1 339 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HNRNPCL3B7ZW38 293 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 C21orf140B9A014 251 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ANKRD65E5RJM6 399 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 STMND1H3BQB6 276 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 UPK1AO00322 258 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HNRNPRO43390 633 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 TBX1O43435 398 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MGRN1O60291 552 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PRAMEF2O60811 474 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PRKRAO75569 313 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CREG1O75629 220 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CDC123O75794 336 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PDE5AO76074 875 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 TNFSF15O95150 251 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HMGN2P05204 90 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 GUSBP08236 651 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HNRNPCL4P0DMR1 293 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 OR12D1P0DN82 309 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 NR2F1P10589 423 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HOXB9P17482 250 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 GGT1P19440 569 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ITIH1P19827 911 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 TCN2P20062 427 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MAOAP21397 527 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 LCN1P31025 176 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 KDELR2P33947 212 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PCGF2P35227 344 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 KRT20P35900 424 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FOLR3P41439 243 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CDK9P50750 372 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 GZMMP51124 257 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CLCN2P51788 898 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PDX1P52945 283 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CRISP3P54108 245 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 POLE2P56282 527 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 POU6F2P78424 691 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HPCAP84074 193 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CDK6Q00534 326 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MS4A2Q01362 244 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 RHAGQ02094 409 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 RHDQ02161 417 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ID2Q02363 134 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CHRNB3Q05901 458 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FUT7Q11130 342 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SCARB2Q14108 478 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MYBPC3Q14896 1274 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ZSWIM7Q19AV6 140 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 GTDC1Q4AE62 458 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FAM98BQ52LJ0 330 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 GPAT3Q53EU6 434 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 TRMT12Q53H54 448 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF628Q5EBL2 1059 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 C3orf38Q5JPI3 329 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 LCN8Q6JVE9 175 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FAM180BQ6P0A1 224 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FAM111BQ6SJ93 734 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 TMEM107Q6UX40 140 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF517Q6ZMY9 492 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 LRRC74BQ6ZQY2 392 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CCDC80Q76M96 950 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLC29A4Q7RTT9 530 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms