RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 MYBPC1Q00872 1141 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 FUT7Q11130 342 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 SNX1Q13596 522 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 ENPP2Q13822 863 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 BTG3Q14201 252 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-205ENST00000550592 KARSQ15046 597 aaKnown RBP3.95□□□□□ -1.78
LIMA1-205ENST00000550592 CCL14Q16627 93 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 UNC50Q53HI1 259 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 AGAP7PQ5VUJ5 663 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 LIPKQ5VXJ0 399 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF343Q6P1L6 599 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 AMZ2Q86W34 360 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 ABHD12Q8N2K0 398 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 SAMD12Q8N8I0 201 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 MLKLQ8NB16 471 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 MINDY2Q8NBR6 621 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 ANKRD20A12PQ8NF67 263 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 OR56B1Q8NGI3 324 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 C19orf43Q9BQ61 176 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 NLNQ9BYT8 704 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 RAB17Q9H0T7 212 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 JPT2Q9H910 190 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 SP140LQ9H930 580 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 GTSE1Q9NYZ3 720 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.95□□□□□ -1.78
LIMA1-205ENST00000550592 PLA2G4CQ9UP65 541 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 MAST4O15021 2626 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 EP300Q09472 2414 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-205ENST00000550592 C5orf42Q9H799 3197 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 LTBP2Q14767 1821 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 USP34Q70CQ2 3546 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 CFAP47Q6ZTR5 3102 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 GAKO14976 1311 aa3.95□□□□□ -1.78
LIMA1-205ENST00000550592 B3GALNT1O75752 331 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 PTBP3O95758 552 aaKnown RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 HPRP00739 348 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 HCKP08631 526 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 OR9G9P0C7N8 305 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 GHRP10912 638 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 RALAP11233 206 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 FUT1P19526 365 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF10P21506 573 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 CCND2P30279 289 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 NBL1P41271 181 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 MATKP42679 507 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 CAMLGP49069 296 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 SLC26A5P58743 744 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 GMFBP60983 142 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 RPS8P62241 208 aaKnown RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 GABPB1Q06547 395 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 CD300CQ08708 224 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 SPP2Q13103 211 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 TTC31Q49AM3 519 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 C9orf66Q5T8R8 295 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 C12orf60Q5U649 245 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 RAET1GQ6H3X3 334 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 DPY19L2P2Q6ZN68 376 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 SYVN1Q86TM6 617 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 RANBP3LQ86VV4 465 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 CATSPER3Q86XQ3 398 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 Q8N377 158 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 C4orf32Q8N8J7 132 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF397Q8NF99 534 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 NTNG2Q96CW9 530 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF597Q96LX8 424 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 CPXM1Q96SM3 734 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 LIME1Q9H400 295 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 TMEM231Q9H6L2 316 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 EIF3KQ9UBQ5 218 aaKnown RBP3.94□□□□□ -1.78
LIMA1-205ENST00000550592 CIDEBQ9UHD4 219 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 BCAP29Q9UHQ4 241 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 EMCNQ9ULC0 261 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 MGAT4AQ9UM21 535 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 FBXO7Q9Y3I1 522 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 WDFY4Q6ZS81 3184 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 TECTAO75443 2155 aa3.94□□□□□ -1.78
LIMA1-205ENST00000550592 NUP98P52948 1817 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 DCHS1Q96JQ0 3298 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 RPAP1Q9BWH6 1393 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-205ENST00000550592 CLRN2A0PK11 232 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 RPL37AP8A6NKH3 93 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 STK17BO94768 372 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 TRIM16O95361 564 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 SEMA4FO95754 770 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 OAS1P00973 400 aaKnown RBP3.93□□□□□ -1.78
LIMA1-205ENST00000550592 CHRNA3P32297 505 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 SPRP35270 261 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-205ENST00000550592 GSK3BP49841 420 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 SGSHP51688 502 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 HTD2P86397 168 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ACY1Q03154 408 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 DPYSQ14117 519 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF699Q32M78 642 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 SNAI3Q3KNW1 292 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ANKRD55Q3KP44 614 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ACSF3Q4G176 576 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-205ENST00000550592 TCHHL1Q5QJ38 904 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-205ENST00000550592 IRGCQ6NXR0 463 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 PAQR6Q6TCH4 344 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms