RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CNRIP1Q96F85 164 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 C16orf58Q96GQ5 468 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 NECTIN4Q96NY8 510 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 THAP7Q9BT49 309 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 AICDAQ9GZX7 198 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 BABAM2Q9NXR7 383 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 NLGN3Q9NZ94 848 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 PTTG3PQ9NZH4 202 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC23A2Q9UGH3 650 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ABT1Q9ULW3 272 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ING4Q9UNL4 249 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 GPR55Q9Y2T6 319 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CHST2Q9Y4C5 530 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 KCNE3Q9Y6H6 103 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 A0A0A6YYJ9 748 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC9A3R1O14745 358 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 PPM1DO15297 605 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 FABP7O15540 132 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 EMC8O43402 210 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 HRO43593 1189 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CHP2O43745 196 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ICMTO60725 284 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ERAL1O75616 437 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 FGF18O76093 207 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 OR5F1O95221 314 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CXCL14O95715 111 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 SERPIND1P05546 499 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 NDUFV2P19404 249 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 M6PRP20645 277 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 AHCYP23526 432 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 F8A1P23610 371 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 PITPNBP48739 271 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 PRDX1Q06830 199 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 IKZF1Q13422 519 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ZIC1Q15915 447 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 C9orf64Q5T6V5 341 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ZBTB37Q5TC79 503 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 MRM1Q6IN84 353 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ANKRD54Q6NXT1 300 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ADAMTSL4Q6UY14 1074 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 WASH2PQ6VEQ5 465 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ANKRD33Q7Z3H0 272 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 C11orf74Q86VG3 221 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 LRRTM4Q86VH4 590 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 AMIGO1Q86WK6 493 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 NR2C2APQ86WQ0 139 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 NKAIN4Q8IVV8 208 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 RAB42Q8N4Z0 105 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ACBD7Q8N6N7 88 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 SIRT6Q8N6T7 355 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 LRRC17Q8N6Y2 441 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 BBS1Q8NFJ9 593 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CXorf40AQ8TE69 158 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 OR8D1Q8WZ84 308 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 SCMH1Q96GD3 660 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 AHCYL2Q96HN2 611 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 GPR137Q96N19 417 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.24□□□□□ -0.936e-8■□□□□ 9.1
SMARCD1-205ENST00000548573 MED28Q9H204 178 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ABCG5Q9H222 651 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 OSGEPL1Q9H4B0 414 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 RANBP3Q9H6Z4 567 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ATP13A2Q9NQ11 1180 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 HINT3Q9NQE9 182 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 IMP3Q9NV31 184 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 SLC23A1Q9UHI7 598 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 TEKT2Q9UIF3 430 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ENTPD4Q9Y227 616 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 GPSM3Q9Y4H4 160 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 CACNG2Q9Y698 323 aa9.24□□□□□ -0.93
SMARCD1-205ENST00000548573 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 A0A1W2PQ72 361 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 A0A1W2PR48 441 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 GSAPA4D1B5 854 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 SOCS6O14544 535 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 SHOXO15266 292 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 FRS3O43559 492 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 PRKRAO75569 313 aaKnown RBP9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 PAHP00439 452 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 GNRH1P01148 92 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 NPR2P20594 1047 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 PAICSP22234 425 aaKnown RBP9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 HIST1H1TP22492 207 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 ACSL1P33121 698 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 THBS2P35442 1172 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 GPR4P46093 362 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 AP2S1P53680 142 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 DEFB103AP81534 67 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 DUSP2Q05923 314 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 LRRC32Q14392 662 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 DHCR24Q15392 516 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 TRAM1Q15629 374 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 CCDC85BQ15834 202 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 FAM205BPQ63HN1 556 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 CDC73Q6P1J9 531 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 PLEKHM3Q6ZWE6 761 aa9.23□□□□□ -0.93
SMARCD1-205ENST00000548573 GET4Q7L5D6 327 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms