RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 L2HGDHQ9H9P8 463 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 PPCSQ9HAB8 311 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 Q9N2J8 555 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 EQTNQ9NQ60 294 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 SDHAF3Q9NRP4 125 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 FAM120CQ9NX05 1096 aaKnown RBP12.05□□□□□ -0.48
CPSF6-204ENST00000547486 ABCG2Q9UNQ0 655 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 HRNRQ86YZ3 2850 aaPredicted RBP12.05□□□□□ -0.48
CPSF6-204ENST00000547486 MED13LQ71F56 2210 aa12.05□□□□□ -0.48
CPSF6-204ENST00000547486 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 TLDC2A0PJX2 215 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 OR2M5A3KFT3 312 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 TMEM233B4DJY2 109 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 SHISA8B8ZZ34 492 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 LSM1O15116 133 aaKnown RBP12.04□□□□□ -0.48
CPSF6-204ENST00000547486 GMFGO60234 142 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 TRIM13O60858 407 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 UTS2O95399 124 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 CHRNGP07510 517 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 PRPS2P11908 318 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 PEPDP12955 493 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 ALDH3A1P30838 453 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 PRKAG1P54619 331 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 CLDN20P56880 219 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 FAM27E3Q08E93 113 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 ZNHIT3Q15649 155 aaPredicted RBP12.04□□□□□ -0.48
CPSF6-204ENST00000547486 RAET1LQ5VY80 246 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 KANK2Q63ZY3 851 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 BANPQ8N9N5 519 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 OR4C3Q8NH37 302 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 PPCDCQ96CD2 204 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 C1GALT1C1Q96EU7 318 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 GIMAP5Q96F15 307 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 C16orf58Q96GQ5 468 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 DACH2Q96NX9 599 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 CCT7Q99832 543 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 PIGMQ9H3S5 423 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 REEP4Q9H6H4 257 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 AKAP6Q13023 2319 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 DOCK7Q96N67 2140 aa12.04□□□□□ -0.48
CPSF6-204ENST00000547486 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 MPDZO75970 2070 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 IGLV3-32A0A0A0MS00 114 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 PDPK1O15530 556 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 TBX19O60806 448 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 NKX2-2O95096 273 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ANGPTL1O95841 491 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 HRGP04196 525 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 FGF4P08620 206 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 IFI6P09912 130 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 CD99P14209 185 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 DNASE1P24855 282 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 FRKP42685 505 aaPredicted RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 CPA2P48052 419 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 PRR5P85299 388 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 PDE7AQ13946 482 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 POU4F3Q15319 338 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 TMEM44Q2T9K0 475 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 GRAMD1BQ3KR37 738 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ARL13AQ5H913 290 aaPredicted RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 FBXW10Q5XX13 1052 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 VWA1Q6PCB0 445 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 RNF165Q6ZSG1 346 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 CHMP1BQ7LBR1 199 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 P4HA3Q7Z4N8 544 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 SLC16A11Q8NCK7 471 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 NUP43Q8NFH3 380 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 NUDT8Q8WV74 236 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 DTNBP1Q96EV8 351 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ZNF764Q96H86 408 aaPredicted RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ZNF845Q96IR2 970 aaPredicted RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 NPAS1Q99742 590 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 YIPF4Q9BSR8 244 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 MECRQ9BV79 373 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ANKZF1Q9H8Y5 726 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 FBXO34Q9NWN3 711 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 SH3BP4Q9P0V3 963 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 NTMQ9P121 344 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 SLC17A7Q9P2U7 560 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 GIMAP2Q9UG22 337 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 MRTO4Q9UKD2 239 aaKnown RBP12.03□□□□□ -0.48
CPSF6-204ENST00000547486 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 TRAF6Q9Y4K3 522 aa12.03□□□□□ -0.48
CPSF6-204ENST00000547486 ZNF469Q96JG9 3925 aaPredicted RBP12.02□□□□□ -0.48
CPSF6-204ENST00000547486 ZFHX3Q15911 3703 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 ITPR3Q14573 2671 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 SH3D21A4FU49 640 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 H3BML4 177 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 SEC14L5O43304 696 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms