RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 MAPK11Q15759 364 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF141Q15928 474 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 NTRK2Q16620 822 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 FLYWCH1Q4VC44 716 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 EIPR1Q53HC9 387 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 TCTN3Q6NUS6 607 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 UNQ6494/PRO21346Q6UXR6 183 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 MISPQ8IVT2 679 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 ANKFN1Q8N957 763 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 FBXO30Q8TB52 745 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 DOK4Q8TEW6 326 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 FIG4Q92562 907 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 PIK3R3Q92569 461 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 MAL2Q969L2 176 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 FAM162AQ96A26 154 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 TMCO6Q96DC7 493 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 SPACA9Q96E40 222 aaPredicted RBP14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 OMA1Q96E52 524 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 RASL10BQ96S79 203 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF232Q9UNY5 417 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 AGAP5A6NIR3 686 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 NPIPB9F8W1W9 429 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 NKX2-8O15522 239 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 PRKNO60260 465 aaPredicted RBP14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ITGA10O75578 1167 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 NADKO95544 446 aaPredicted RBP14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ALPPP05187 535 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ITGA3P26006 1051 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ADH7P40394 386 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 CASRP41180 1078 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 CLK3P49761 638 aaKnown RBP14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ATP12AP54707 1039 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 CASP9P55211 416 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 TLE3Q04726 772 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 Q0VFX4 171 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 SNTA1Q13424 505 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 LIN52Q52LA3 116 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 RNF220Q5VTB9 566 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 CBLL1Q75N03 491 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ARMC8Q8IUR7 673 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 FAM13CQ8NE31 585 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 PSMF1Q92530 271 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 TMBIM1Q969X1 311 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 THOC3Q96J01 351 aaKnown RBP14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 ING2Q9H160 280 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 MAGIXQ9H6Y5 334 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 DCAF13Q9NV06 445 aaKnown RBP14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 SEC14L3Q9UDX4 400 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 EGFL7Q9UHF1 273 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 PCDHGB7Q9Y5F8 929 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 KCNE3Q9Y6H6 103 aa14.76□□□□□ -0.05
PRPF40A-212ENST00000545856 GXYLT2A0PJZ3 443 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 H3BNH8 94 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 K7ENP7 123 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 REM1O75628 298 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 CEACAM4O75871 244 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 OR2J2O76002 312 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 TBXA2RP21731 343 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 MS4A2Q01362 244 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 RHDQ02161 417 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 CHRNEQ04844 493 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 TBCELQ5QJ74 424 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 ACER2Q5QJU3 275 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 ABHD17BQ5VST6 288 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 AGAP7PQ5VUJ5 663 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 INO80CQ6PI98 192 aaPredicted RBP14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 DHRS4L2Q6PKH6 230 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 EIF3MQ7L2H7 374 aaKnown RBP14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 WDR53Q7Z5U6 358 aaPredicted RBP14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 FAM156AQ8NDB6 213 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 BRIX1Q8TDN6 353 aaKnown RBP14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 SLC26A7Q8TE54 656 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 RNF138Q8WVD3 245 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 ASB15Q8WXK1 588 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 DUS3LQ96G46 650 aaKnown RBP14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 AGAP4Q96P64 663 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 LMF1Q96S06 567 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 PINK1Q9BXM7 581 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 UGT2B28Q9BY64 529 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 PCDHAC1Q9H158 963 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 PIF1Q9H611 641 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 RUBCNLQ9H714 662 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 KLHL28Q9NXS3 571 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 SLC35A3Q9Y2D2 325 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 ASPMQ8IZT6 3477 aa14.75□□□□□ -0.05
PRPF40A-212ENST00000545856 ARGFXA6NJG6 315 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 WWP2O00308 870 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 SCDO00767 359 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 SUV39H1O43463 412 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 MFN2O95140 757 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 PABPC4LP0CB38 370 aaKnown RBP14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 NID1P14543 1247 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 HPGDP15428 266 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 WT1P19544 449 aaPredicted RBP14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 DCTP40126 519 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 SELENOWP63302 87 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 FOXK2Q01167 660 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 ZFP1Q6P2D0 407 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 ISLR2Q6UXK2 745 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 GRAMD2AQ8IUY3 354 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms