RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 LNX2Q8N448 690 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ACOT4Q8N9L9 421 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 L3MBTL4Q8NA19 623 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 CLSTN3Q9BQT9 956 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 MED17Q9NVC6 651 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 C2orf42Q9NWW7 574 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 IGLV3-10A0A075B6K4 115 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 C12orf71A8MTZ7 269 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 IL1AP01583 271 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 TM4SF4P48230 202 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 CTXN1P60606 82 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 SGCAQ16586 387 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 C6orf183Q5T699 404 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 FTMTQ8N4E7 242 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM102Q8N9M5 508 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 OR6Q1Q8NGQ2 317 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PEX11GQ96HA9 241 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 BEX2Q9BXY8 128 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 BEX1Q9HBH7 125 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 KCNN3Q9UGI6 736 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PRAMEF26H0Y7S4 382 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 M0R036 132 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 VNN2O95498 520 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 CSF1P09603 554 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 GM2AP17900 193 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 DSC1Q08554 894 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PIN1Q13526 163 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 METTL11BQ5VVY1 283 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF704Q6ZNC4 412 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 TRIM46Q7Z4K8 759 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 CPOQ8IVL8 374 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 OR4N5Q8IXE1 308 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 OR5T2Q8NGG2 359 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 OR5J2Q8NH18 312 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 CCDC120Q96HB5 630 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 SLC6A16Q9GZN6 736 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ZBTB20Q9HC78 741 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 GSKIPQ9P0R6 139 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 RARRES3Q9UL19 164 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 HS3ST2Q9Y278 367 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 GPR52Q9Y2T5 361 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 SYPP08247 313 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 HOXD9P28356 352 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 FXYD6P3P58550 94 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 EFR3AQ14156 821 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 SSX6Q7RTT6 188 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 FOXRED2Q8IWF2 684 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ZFP41Q8N8Y5 198 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 WDR77Q9BQA1 342 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 LDAHQ9H6V9 325 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 THSD1Q9NS62 852 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PCDHGA3Q9Y5H0 932 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 FOXD2O60548 495 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 DAP3P51398 398 aaKnown RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 RNASE10Q5GAN6 216 aaKnown RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 DCST2Q5T1A1 773 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 BEST3Q8N1M1 668 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 POGLUT1Q8NBL1 392 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF480Q8WV37 535 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 DHRS1Q96LJ7 313 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 DPH1Q9BZG8 443 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 OLAHQ9NV23 265 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 PIAS3Q9Y6X2 628 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 PROS1P07225 676 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 ACPPP15309 386 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 IL1RNP18510 177 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 LHCGRP22888 699 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 GABRB3P28472 473 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 S100A2P29034 98 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 RGRP47804 291 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 HNRNPFP52597 415 aaKnown RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 FAM189BP81408 668 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 HMGN2P46Q86SG4 172 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 LINC01465Q8N7H1 131 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 OR7A17O14581 309 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 ACP2P11117 423 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 RGS6P49758 472 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 TOX2Q96NM4 488 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 NECAB3Q96P71 396 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 CACNG2Q9Y698 323 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 ITGB4P16144 1822 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 THEGLP0DJG4 465 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 HTR3AP46098 478 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 LRFN4Q6PJG9 635 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 KIAA1143Q96AT1 154 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 OR10A4Q9H209 315 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 LINC00597Q9H2U6 94 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 IL33O95760 270 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 CNIH2Q6PI25 160 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 GSG1LQ6UXU4 331 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 PXKQ7Z7A4 578 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 OR52E1Q8NGJ3 308 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms