RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PRAMEF27A3QJZ7 478 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 PRAMEF25A6NGN4 478 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 KLRC4-KLRK1H3BQV0 150 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 FXYD1O00168 92 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 RASAL1O95294 804 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 UTS2O95399 124 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 NPPAP01160 153 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 CASP3P42574 277 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 MEOX1P50221 254 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 MTPNP58546 118 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 PMP22Q01453 160 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 FUT5Q11128 374 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 SELPLGQ14242 412 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 TBCELQ5QJ74 424 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 OLIG3Q7RTU3 272 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 C10orf111Q8N326 155 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
SP140-213ENST00000543928 OR2M7Q8NG81 312 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 GRHL3Q8TE85 626 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 ROPN1LQ96C74 230 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 FAM173AQ9BQD7 235 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 THUMPD3Q9BV44 507 aaKnown RBP12.49□□□□□ -0.41
SP140-213ENST00000543928 ANGPTL4Q9BY76 406 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 ARL8BQ9NVJ2 186 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 KLRF1Q9NZS2 232 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 NINQ8N4C6 2090 aa12.49□□□□□ -0.41
SP140-213ENST00000543928 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
SP140-213ENST00000543928 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 FADS1O60427 444 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 STX11O75558 287 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 NUDT7P0C024 238 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 GPX2P18283 190 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 LCN1P31025 176 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 EVI2BP34910 448 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 PTGDSP41222 190 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 CPA2P48052 419 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 KCNJ2P63252 427 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 HPCAP84074 193 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 INAQ16352 499 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 SYPL1Q16563 259 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 GPAT3Q53EU6 434 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 SLC30A6Q6NXT4 461 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 TMEM81Q6P7N7 255 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
SP140-213ENST00000543928 ANKFN1Q8N957 763 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 RNF138Q8WVD3 245 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 OSBPL11Q9BXB4 747 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 ZNF350Q9GZX5 532 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 EFCAB1Q9HAE3 211 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 THUMPD1Q9NXG2 353 aaKnown RBP12.48□□□□□ -0.41
SP140-213ENST00000543928 TUBA8Q9NY65 449 aaPredicted RBP12.48□□□□□ -0.41
SP140-213ENST00000543928 P2RX2Q9UBL9 471 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.48□□□□□ -0.41
SP140-213ENST00000543928 SMG1Q96Q15 3661 aaKnown RBP12.48□□□□□ -0.41
SP140-213ENST00000543928 KALRNO60229 2985 aa12.48□□□□□ -0.41
SP140-213ENST00000543928 NPIPA5A0A0B4J1W7 369 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 NPIPA7E9PJI5 369 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 SCO2O43819 266 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 SLC28A2O43868 658 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 FCMRO60667 390 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 TNFRSF21O75509 655 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 C1QL1O75973 258 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 SNX4O95219 450 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 ZIC2O95409 532 aaPredicted RBP12.47□□□□□ -0.41
SP140-213ENST00000543928 H6PDO95479 791 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 OXSR1O95747 527 aaPredicted RBP12.47□□□□□ -0.41
SP140-213ENST00000543928 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 NPIPA8P0DM63 369 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 NR2F1P10589 423 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 BMP2P12643 396 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 RFC3P40938 356 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 NUDT2P50583 147 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 SNTA1Q13424 505 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 ART3Q13508 389 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 GPR68Q15743 365 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 FLYWCH1Q4VC44 716 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 PRR30Q53SZ7 412 aaPredicted RBP12.47□□□□□ -0.41
SP140-213ENST00000543928 RABL3Q5HYI8 236 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 GCNT6Q5T4J0 391 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
SP140-213ENST00000543928 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 POGLUT1Q8NBL1 392 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 OR8J3Q8NGG0 315 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 OR4C3Q8NH37 302 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 MAL2Q969L2 176 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 JSRP1Q96MG2 331 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms