RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	DOCK7	Q96N67	2140 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-215	ENST00000540987	MBD3L3	A6NE82	208 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-215	ENST00000540987	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-215	ENST00000540987	TTC36	A6NLP5	189 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	EMC8	O43402	210 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	ZIC3	O60481	467 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	ZWINT	O95229	277 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	G6PD	P11413	515 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	DPP4	P27487	766 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	STAR	P49675	285 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	LHX2	P50458	406 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	ZNF136	P52737	540 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	DLX5	P56178	289 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	KRTAP10-9	P60411	292 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	MLC1	Q15049	377 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	DUSP5	Q16690	384 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	SLC25A35	Q3KQZ1	300 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	PLXDC2	Q6UX71	529 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	APOOL	Q6UXV4	268 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	MARCH3	Q86UD3	253 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	IFNE	Q86WN2	208 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	LURAP1L	Q8IV03	231 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	TRIM42	Q8IWZ5	723 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	CDRT4	Q8N9R6	151 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	C9orf106	Q8NAJ2	232 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	SLC16A11	Q8NCK7	471 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-215	ENST00000540987	GPR151	Q8TDV0	419 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	SLC9A6	Q92581	669 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	C16orf58	Q96GQ5	468 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	LURAP1	Q96LR2	239 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	SFXN2	Q96NB2	322 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	TRIB1	Q96RU8	372 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	TUBA1C	Q9BQE3	449 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	DSN1	Q9H410	356 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	CXorf36	Q9H7Y0	433 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	ASIC5	Q9NY37	505 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	HAO1	Q9UJM8	370 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.37	□□□□□ -0.43
POLE-215	ENST00000540987	RAP2C	Q9Y3L5	183 aa		12.37	□□□□□ -0.43
POLE-215	ENST00000540987	CREBBP	Q92793	2442 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	CD8B2	A6NJW9	211 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	HSPB2	A8KAH6	182 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	FAM47E-STBD1	D6RA91	191 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	C6orf47	O95873	294 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	TUBB	P07437	444 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	CPN1	P15169	458 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	RPL3	P39023	403 aa	Known RBP	12.36	□□□□□ -0.43
POLE-215	ENST00000540987	SLC1A6	P48664	564 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	CLDN18	P56856	261 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	WDR4	P57081	412 aa	Known RBP	12.36	□□□□□ -0.43
POLE-215	ENST00000540987	C21orf58	P58505	322 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	HSPB2	Q16082	182 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	ADGRE4P	Q86SQ3	457 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.36	□□□□□ -0.43
POLE-215	ENST00000540987	ANKRD42	Q8N9B4	389 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	CEP70	Q8NHQ1	597 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	PSMA8	Q8TAA3	256 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	FAM110B	Q8TC76	370 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	COQ8B	Q96D53	544 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	C14orf79	Q96F83	325 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	YIPF4	Q9BSR8	244 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	AKTIP	Q9H8T0	292 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	C3orf14	Q9HBI5	128 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	KCNK9	Q9NPC2	374 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	ZCCHC3	Q9NUD5	404 aa	Known RBP	12.36	□□□□□ -0.43
POLE-215	ENST00000540987	FBXO34	Q9NWN3	711 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	MED11	Q9P086	117 aa		12.36	□□□□□ -0.43
POLE-215	ENST00000540987	PCNX3	Q9H6A9	2034 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987		A0A1W2PRB8	838 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987		H0Y3Z8	333 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	KCNK2	O95069	426 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	KCNH1	O95259	989 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	OXSR1	O95747	527 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-215	ENST00000540987	ZNF708	P17019	499 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	SSTR2	P30874	369 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	GCK	P35557	465 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	TIMP3	P35625	211 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	DIO3	P55073	304 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	DSCR4	P56555	118 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-215	ENST00000540987	EMX2	Q04743	252 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	SRY	Q05066	204 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	BST1	Q10588	318 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	LASP1	Q14847	261 aa	Known RBP	12.35	□□□□□ -0.43
POLE-215	ENST00000540987	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
POLE-215	ENST00000540987	VPS26B	Q4G0F5	336 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	CCNJ	Q5T5M9	372 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	CPTP	Q5TA50	214 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	FIGNL1	Q6PIW4	674 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	CAMKMT	Q7Z624	323 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	ZPLD1	Q8TCW7	415 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	OR5P2	Q8WZ92	322 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	SH3GL2	Q99962	352 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	KLHDC3	Q9BQ90	382 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	PNPO	Q9NVS9	261 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	CLCF1	Q9UBD9	225 aa		12.35	□□□□□ -0.43
POLE-215	ENST00000540987	MRTO4	Q9UKD2	239 aa	Known RBP	12.35	□□□□□ -0.43
POLE-215	ENST00000540987	EIF3L	Q9Y262	564 aa	Known RBP	12.35	□□□□□ -0.43
POLE-215	ENST00000540987	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms