RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SHROOM3Q8TF72 1996 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 A0A0B4J293 547 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 A0A0D9SEW6 157 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 LOC100289279A0A1B0GTE1 492 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 A0A1B0GVI7 797 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 FAM240BA0A1B0GVZ2 78 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 C7orf66A4D0T2 115 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 IQCF5A8MTL0 148 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PRRT4C9JH25 899 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NEDD8-MDP1E9PL57 170 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 FAAHO00519 579 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 GAPDHSO14556 408 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 GPR39O43194 453 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 LYRM1O43325 122 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 OIP5O43482 229 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 BRINP1O60477 761 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 TBX19O60806 448 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 SOCS5O75159 536 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ENTPD6O75354 484 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ITGA10O75578 1167 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CDRT1O95170 752 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 GADD45GO95257 159 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CPSF4O95639 269 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 TRBC1P01850 177 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 TP53P04637 393 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 TPOP07202 933 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 RHOCP08134 193 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CISD3P0C7P0 127 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 MSL3P1P0C860 447 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 SLC2A2P11168 524 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 LAMP1P11279 417 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CYP2A6P11509 494 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 HLA-EP13747 358 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NAGAP17050 411 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CD53P19397 219 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 C4BPBP20851 252 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ATP5C1P36542 298 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 GSTM5P46439 218 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 DGKGP49619 791 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 AFF3P51826 1226 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NUDT6P53370 316 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 MAPK12P53778 367 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CDH12P55289 794 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PER3P56645 1201 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ABATP80404 500 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CD83Q01151 205 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ACSM2AQ08AH3 577 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 RAB40BQ12829 278 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 SCARB2Q14108 478 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ARHGEF7Q14155 803 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 SEC23BQ15437 767 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 GRK1Q15835 563 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CDKN3Q16667 212 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NDUFAF5Q5TEU4 345 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CD276Q5ZPR3 534 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ACSM2BQ68CK6 577 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 GRHL2Q6ISB3 625 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 KLHL17Q6TDP4 642 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 Q6ZPB1 254 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 LHFPL2Q6ZUX7 228 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 MRGPREQ86SM8 312 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 AMIGO1Q86WK6 493 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NAGSQ8N159 534 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NXPE1Q8N323 547 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 C9orf62Q8N4C0 152 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ESX1Q8N693 406 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 OR7D4Q8NG98 312 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 LHFPL5Q8TAF8 219 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NR4A3Q92570 626 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 HGDQ93099 445 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PPP1R14AQ96A00 147 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 RNF31Q96EP0 1072 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PPP1R16AQ96I34 528 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 CAMK1GQ96NX5 476 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 SMAD5Q99717 465 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 MYOCQ99972 504 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ASB8Q9H765 288 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 IL26Q9NPH9 171 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 TM7SF3Q9NS93 570 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 RLIMQ9NVW2 624 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ARL15Q9NXU5 204 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 THAP10Q9P2Z0 257 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ACAD8Q9UKU7 415 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ICKQ9UPZ9 632 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 POLHQ9Y253 713 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ANGPT4Q9Y264 503 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 HIF3AQ9Y2N7 669 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 RAXQ9Y2V3 346 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 EXOSC1Q9Y3B2 195 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 SF3B6Q9Y3B4 125 aaKnown RBP7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PPIL1Q9Y3C6 166 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 PCDHGA1Q9Y5H4 931 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 ALG5Q9Y673 324 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 MYOFQ9NZM1 2061 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 KALRNO60229 2985 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 BPTFQ12830 3046 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 MYLKQ15746 1914 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms