RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GSAPA4D1B5 854 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SURF4O15260 269 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 HPXP02790 462 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 HSPB3Q12988 150 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 ZMYND11Q15326 602 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 TCTE1Q5JU00 501 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 RGS7BPQ6MZT1 257 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 FAM198BQ6UWH4 519 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 LILRA3Q8N6C8 439 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SCAMP4Q969E2 229 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 DDOQ99489 341 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 FAIM2Q9BWQ8 316 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 ISG20L2Q9H9L3 353 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 CTPS2Q9NRF8 586 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SIRT3Q9NTG7 399 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 MED17Q9NVC6 651 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC9B1P1A6NJY1 282 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 A8MXK9 166 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 PEX14O75381 377 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 CH25HO95992 272 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 OR10A3P58181 314 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 DGCR2P98153 550 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 PITPNAQ00169 270 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 MEF2AQ02078 507 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 DHODHQ02127 395 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 LRRC73Q5JTD7 316 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 CDC73Q6P1J9 531 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 FUT10Q6P4F1 479 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 ZNF527Q8NB42 609 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 MARC2Q969Z3 335 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 IFT46Q9NQC8 304 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 MARCH5Q9NX47 278 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 BABAM2Q9NXR7 383 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SPATA2Q9UM82 520 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 BAIAP2Q9UQB8 552 aa17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SIRT4Q9Y6E7 314 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC22A23A1A5C7 686 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 BNIP3LO60238 219 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 EPPINO95925 133 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 PPP2R1BP30154 601 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 TRIM23P36406 574 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SP3Q02447 781 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 ZSWIM7Q19AV6 140 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC30A6Q6NXT4 461 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 DDX31Q9H8H2 851 aaKnown RBP17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 CNIH4Q9P003 139 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 A0A0G2JK05 382 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC5A10A0PJK1 596 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SNAPC5O75971 98 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 NR2F1P10589 423 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SNTB2Q13425 540 aaKnown RBP17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 DYRK1AQ13627 763 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 DEFB115Q30KQ5 88 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 LINC00518Q8N0U6 118 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SIRT6Q8N6T7 355 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 SPATA5L1Q9BVQ7 753 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 C20orf85Q9H1P6 137 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 BRD7Q9NPI1 651 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 NLGN3Q9NZ94 848 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 OR6C2Q9NZP2 312 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 RPS6KB2Q9UBS0 482 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 HRH3Q9Y5N1 445 aa17.41■□□□□ 0.38
SFSWAP-207ENST00000538548 LRRN3E7EW58 273 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 TBX19O60806 448 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 TGM6O95932 706 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 MT-ND4P03905 459 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 RNASE12Q5GAN4 147 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 PRSS55Q6UWB4 352 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 GET4Q7L5D6 327 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 BBS1Q8NFJ9 593 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 OR4Q3Q8NH05 313 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 XAGE5Q8WWM1 108 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC5A11Q8WWX8 675 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 LINC01599Q8WXQ3 324 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 OSTF1Q92882 214 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 LRRN3Q9H3W5 708 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 BEX1Q9HBH7 125 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 J3QRE1 110 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 SEPT4O43236 478 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 NMBP08949 121 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 ANKRD34CP0C6C1 535 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 GRIN2CQ14957 1233 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 FAM26DQ5JW98 314 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 NXPE4Q6UWF7 544 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 SLC9B2Q86UD5 537 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 MOSPD2Q8NHP6 518 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 HAVCR2Q8TDQ0 301 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 AHCYL2Q96HN2 611 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 ZFP3Q96NJ6 502 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 FCRL4Q96PJ5 515 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 SGPP1Q9BX95 441 aa17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 MS4A7Q9GZW8 240 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-207ENST00000538548 PLXND1Q9Y4D7 1925 aa17.39■□□□□ 0.38
SFSWAP-207ENST00000538548 TRABD2BA6NFA1 517 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 ADAM12O43184 909 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 PRAF2O60831 178 aa17.39■□□□□ 0.37
SFSWAP-207ENST00000538548 GNSP15586 552 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms