RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PABPC4LP0CB38 370 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 SDC1P18827 310 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 IDUAP35475 653 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 DCTP40126 519 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PGFP49763 221 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SIRPAP78324 504 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 RSU1Q15404 277 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PIP5KL1Q5T9C9 394 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MEDAGQ5VYS4 303 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 Q6ZS52 159 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CYS1Q717R9 158 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 VRK2Q86Y07 508 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TOMM5Q8N4H5 51 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 GALNT11Q8NCW6 608 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZFPM2Q8WW38 1151 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TRIM63Q969Q1 353 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SPTSSAQ969W0 71 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 NEDD4LQ96PU5 975 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SLC6A16Q9GZN6 736 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PITHD1Q9GZP4 211 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 LTB4R2Q9NPC1 389 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SACM1LQ9NTJ5 587 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 EURLQ9NYK6 297 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MYEF2Q9P2K5 600 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 NENFQ9UMX5 172 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PCDHB10Q9UN67 800 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TMEM184BQ9Y519 407 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 PCDHA9Q9Y5H5 950 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 IGHV3-20A0A0C4DH32 117 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TRBV2A0A0J9YWF9 115 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 C17orf113A0A1B0GUU1 675 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TLCD2A6NGC4 264 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 OR7A10O76100 309 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 RLN2P04090 185 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 LCKP06239 509 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PIGFQ07326 219 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CHRFAM7AQ494W8 412 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF585AQ6P3V2 769 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MRPL21Q7Z2W9 205 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 PAQR7Q86WK9 346 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 LRRC18Q8N456 261 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PRR18Q8N4B5 295 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TSPEARQ8WU66 669 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 S100A16Q96FQ6 103 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 MRGPRX1Q96LB2 322 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 DYNLRB1Q9NP97 96 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MYNNQ9NPC7 610 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MKS1Q9NXB0 559 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF443Q9Y2A4 671 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 A0A1W2PPW3 197 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ARHGEF15O94989 841 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TNFSF15O95150 251 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 BPNT1O95861 308 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF806P0C7X5 589 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MAOAP21397 527 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MAP2K4P45985 399 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CSNK1A1P48729 337 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TNFRSF17Q02223 184 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CBLBQ13191 982 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MPP2Q14168 576 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ANKDD1AQ495B1 522 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 GXYLT1Q4G148 440 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 HSD17B12Q53GQ0 312 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 LIPKQ5VXJ0 399 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TMEM236Q5W0B7 351 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 KLBQ86Z14 1044 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PACRGLQ8N7B6 248 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CDC6Q99741 560 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PINK1Q9BXM7 581 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ACTR6Q9GZN1 396 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF160Q9HCG1 818 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ARMC1Q9NVT9 282 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 MICAL3Q7RTP6 2002 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 C13orf42A0A1B0GVH6 325 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TBX10O75333 385 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 OXSR1O95747 527 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 IFNA21P01568 189 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 GNRHRP30968 328 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 GRK5P34947 590 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 CDKN2CP42773 168 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 FAM189A2Q15884 450 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 TYSND1Q2T9J0 566 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF829Q3KNS6 432 aaPredicted RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 KCTD9Q7L273 389 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF595Q8IYB9 648 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SLC37A2Q8TED4 501 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 PATE1Q8WXA2 126 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 METTL2AQ96IZ6 378 aaKnown RBP5.04□□□□□ -1.6
LRP6-203ENST00000538239 SCGB3A2Q96PL1 93 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 BTBD2Q9BX70 525 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 ZNF442Q9H7R0 627 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 WASH6PQ9NQA3 447 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 EMC3Q9P0I2 261 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SLC35A3Q9Y2D2 325 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 R4GN57 208 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 E2F3O00716 465 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 FLRT2O43155 660 aa5.04□□□□□ -1.6
LRP6-203ENST00000538239 SNAP29O95721 258 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms