RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 INHAP05111 366 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 IL5P05113 134 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 BCKDHAP12694 445 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 AKR1C2P52895 323 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 AP3S2P59780 193 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 WDR5P61964 334 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SHC2P98077 582 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NHLH2Q02577 135 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 AKR1C1Q04828 323 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SCAPQ12770 1279 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 MELKQ14680 651 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 KCNA10Q16322 511 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 FAM98CQ17RN3 349 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 AARDQ4LEZ3 155 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 PYY3Q5JQD4 70 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2G6Q5TZ20 316 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 LIPJQ5W064 366 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 AFMIDQ63HM1 303 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF626Q68DY1 528 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 C7orf31Q8N865 590 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 TCEANCQ8N8B7 351 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SP7Q8TDD2 431 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 PXYLP1Q8TE99 480 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 DTD1Q8TEA8 209 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NT5C3BQ969T7 300 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 C14orf79Q96F83 325 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NCOR1P1Q9H4R4 102 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 MRPS30Q9NP92 439 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 THSD1Q9NS62 852 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SEMA3GQ9NS98 782 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RBM22Q9NW64 420 aaKnown RBP eCLIP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 TESQ9UGI8 421 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NPEPPSL1A6NEC2 478 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 MAGEB17A8MXT2 336 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 F5H5P2 479 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2T1O43869 369 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 C22orf31O95567 290 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RAB3DO95716 219 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ADAP00813 363 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 WNT1P04628 370 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 CXCL8P10145 99 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 PRPS2P11908 318 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF35P13682 527 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RPS2P15880 293 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NFYBP25208 207 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 G0S2P27469 103 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 BDKRB2P30411 391 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 AGTR1P30556 359 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RPL3P39023 403 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 WNT3AP56704 352 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 DAOAP59103 153 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 PPIAP62937 165 aaKnown RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ITKQ08881 620 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RAB40BQ12829 278 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 KLF9Q13886 244 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 DHCR24Q15392 516 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 DUOXA1Q1HG43 343 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 NKAPLQ5M9Q1 402 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ELFN2Q5R3F8 820 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SAPCD1Q5SSQ6 148 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 OTUD1Q5VV17 481 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RAB12Q6IQ22 244 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 B3GLCTQ6Y288 498 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 RNF165Q6ZSG1 346 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF621Q6ZSS3 439 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 BMPERQ8N8U9 685 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 OR5T3Q8NGG3 340 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 OR1S2Q8NGQ3 325 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 BRI3BPQ8WY22 251 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ARL11Q969Q4 196 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF707Q96C28 371 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC6A18Q96N87 628 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 LRFN5Q96NI6 719 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZFP3Q96NJ6 502 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ELF4Q99607 663 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 PRDM13Q9H4Q3 707 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZSCAN32Q9NX65 697 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF70Q9UC06 446 aaPredicted RBP8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 ZMIZ1Q9ULJ6 1067 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 FLVCR2Q9UPI3 526 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 CORO2BQ9UQ03 480 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 TRPV2Q9Y5S1 764 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 SIP14410 1827 aa8.02□□□□□ -1.13
SRGAP1-202ENST00000537556 A0A1W2PPE3 182 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 BLOC1S5-TXNDC5H3BN57 136 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 H3BN98 237 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ARPC1BO15143 372 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 EIF4E2O60573 245 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GASTP01350 101 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ANKRD34CP0C6C1 535 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RNH1P13489 461 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 C5AR1P21730 350 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RPL34P49207 117 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RGS19P49795 217 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC5A12Q1EHB4 618 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 C12orf73Q69YU5 71 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SFRP4Q6FHJ7 346 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 HEPHL1Q6MZM0 1159 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms