RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 BCL2L10Q9HD36 194 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 EXPH5Q8NEV8 1989 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 MKRN2OSH3BPM6 223 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 PGM3O95394 542 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 ATP6V1C1P21283 382 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 LCN1P31025 176 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 HLCSP50747 726 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 POLE2P56282 527 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 FBXW4P57775 412 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 HPCAP84074 193 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 CHRNEQ04844 493 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 SLC30A8Q8IWU4 369 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 CLPTM1LQ96KA5 538 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 ARHGAP9Q9BRR9 750 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 RNF32Q9H0A6 362 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 TRIM45Q9H8W5 580 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-208ENST00000537429 HPF1Q9NWY4 346 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 MKLN1Q9UL63 735 aa22.3■■□□□ 1.16
HMGA2-208ENST00000537429 DSPPQ9NZW4 1301 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 A0A0G2JPF8 293 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 HNRNPCL2B2RXH8 293 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 HNRNPCL3B7ZW38 293 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 C5orf58C9J3I9 102 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 WDPCPO95876 746 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 HNRNPCL4P0DMR1 293 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 CYP4B1P13584 511 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 TCN1P20061 433 aaPredicted RBP22.29■■□□□ 1.16
HMGA2-208ENST00000537429 PGM1P36871 562 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 FXNQ16595 210 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 RPS26P11Q5JNZ5 115 aaPredicted RBP22.29■■□□□ 1.16
HMGA2-208ENST00000537429 PGM2L1Q6PCE3 622 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 NUP54Q7Z3B4 507 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 GPALPP1Q8IXQ4 340 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 HGDQ93099 445 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 ANKRD10Q9NXR5 420 aa22.29■■□□□ 1.16
HMGA2-208ENST00000537429 MAP1BP46821 2468 aaKnown RBP22.29■■□□□ 1.16
HMGA2-208ENST00000537429 RRP9O43818 475 aaKnown RBP22.28■■□□□ 1.16
HMGA2-208ENST00000537429 KIAA0513O60268 411 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 PDE5AO76074 875 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 F10P00742 488 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 CD96P40200 585 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 CYB561P49447 251 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 PCBP3P57721 371 aaKnown RBP22.28■■□□□ 1.16
HMGA2-208ENST00000537429 OC90Q02509 493 aaPredicted RBP22.28■■□□□ 1.16
HMGA2-208ENST00000537429 TUBA3CQ13748 450 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 EFR3AQ14156 821 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 COL28A1Q2UY09 1125 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 FLYWCH1Q4VC44 716 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 TUBA3EQ6PEY2 450 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 HPS6Q86YV9 775 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 ZNF619Q8N2I2 560 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 FBXW8Q8N3Y1 598 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 TNIP2Q8NFZ5 429 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 OR4C3Q8NH37 302 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 TTC9Q92623 222 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 HAS2Q92819 552 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 PMM1Q92871 262 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 UTP23Q9BRU9 249 aaKnown RBP22.28■■□□□ 1.16
HMGA2-208ENST00000537429 MMADHCQ9H3L0 296 aaPredicted RBP22.28■■□□□ 1.16
HMGA2-208ENST00000537429 MTHFD2LQ9H903 347 aaPredicted RBP22.28■■□□□ 1.16
HMGA2-208ENST00000537429 PLA2G3Q9NZ20 509 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 ANGPT4Q9Y264 503 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 PCDHGA10Q9Y5H3 936 aa22.28■■□□□ 1.16
HMGA2-208ENST00000537429 NPIPB9F8W1W9 429 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 GCM2O75603 506 aaPredicted RBP22.27■■□□□ 1.16
HMGA2-208ENST00000537429 SORBS2O94875 1100 aaKnown RBP22.27■■□□□ 1.16
HMGA2-208ENST00000537429 ME2P23368 584 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 MSX2P35548 267 aaPredicted RBP22.27■■□□□ 1.16
HMGA2-208ENST00000537429 CASRP41180 1078 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 GPR68Q15743 365 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 ZNF227Q86WZ6 799 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 PTRH1Q86Y79 214 aaKnown RBP22.27■■□□□ 1.16
HMGA2-208ENST00000537429 CYP4Z2PQ8N1L4 340 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 OR10G3Q8NGC4 313 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 OR5M3Q8NGP4 307 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 BBS10Q8TAM1 723 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 MCUR1Q96AQ8 359 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 ZG16BQ96DA0 208 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 SGCZQ96LD1 299 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 FLRT3Q9NZU0 649 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 EGFL7Q9UHF1 273 aa22.27■■□□□ 1.16
HMGA2-208ENST00000537429 HS6ST1O60243 411 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 ICOSLGO75144 302 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 UTS2O95399 124 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 INTS11Q5TA45 600 aaKnown RBP22.26■■□□□ 1.15
HMGA2-208ENST00000537429 CCDC80Q76M96 950 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 FAM13CQ8NE31 585 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 TMCO6Q96DC7 493 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 NODALQ96S42 347 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 SH2D2AQ9NP31 389 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 UBQLN4Q9NRR5 601 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 LRFN1Q9P244 771 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 KCNE5Q9UJ90 142 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 CHCHD2Q9Y6H1 151 aaPredicted RBP22.26■■□□□ 1.15
HMGA2-208ENST00000537429 NPIPA5A0A0B4J1W7 369 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 OR5H15A6NDH6 313 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 NPIPA7E9PJI5 369 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 UGT2B17O75795 530 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 NEURL1O76050 574 aa22.26■■□□□ 1.15
HMGA2-208ENST00000537429 NPIPA8P0DM63 369 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms