RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 FOXF2Q12947 444 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 SNTB1Q13884 538 aaKnown RBP11.92□□□□□ -0.5
MRPS35-202ENST00000536569 FGFBP1Q14512 234 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 PCLAFQ15004 111 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 SH2D4BQ5SQS7 431 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 KANK2Q63ZY3 851 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 CLEC6AQ6EIG7 209 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 ZCCHC12Q6PEW1 402 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 LRIG3Q6UXM1 1119 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 Q6ZSR9 355 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 C10orf107Q8IVU9 208 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 CDRT4Q8N9R6 151 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 EPS8L3Q8TE67 593 aaKnown RBP11.92□□□□□ -0.5
MRPS35-202ENST00000536569 INTS12Q96CB8 462 aaKnown RBP11.92□□□□□ -0.5
MRPS35-202ENST00000536569 PPCDCQ96CD2 204 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 C1GALT1C1Q96EU7 318 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 EGLN2Q96KS0 407 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 ALPK1Q96QP1 1244 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 GATA5Q9BWX5 397 aaPredicted RBP11.92□□□□□ -0.5
MRPS35-202ENST00000536569 DSN1Q9H410 356 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 EML4Q9HC35 981 aaKnown RBP11.92□□□□□ -0.5
MRPS35-202ENST00000536569 STOML1Q9UBI4 398 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 RPH3AQ9Y2J0 694 aaPredicted RBP11.92□□□□□ -0.5
MRPS35-202ENST00000536569 ZNF175Q9Y473 711 aa11.92□□□□□ -0.5
MRPS35-202ENST00000536569 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 A0A1W2PNV4 684 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 SMIM23A6NLE4 172 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 B4DXG7 233 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 LSM1O15116 133 aaKnown RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 SCO2O43819 266 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 TNFSF13O75888 250 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 SOX30O94993 753 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 NKX2-2O95096 273 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 HSPA4LO95757 839 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 NUDT17P0C025 328 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 SDC1P18827 310 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 HK1P19367 917 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 GABRA3P34903 492 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 GPC1P35052 558 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 SERPINB5P36952 375 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 RPL3P39023 403 aaKnown RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 AGFG1P52594 562 aaKnown RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 MANFP55145 182 aaKnown RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 HSPB3Q12988 150 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 PDE7AQ13946 482 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 MLC1Q15049 377 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 RAET1LQ5VY80 246 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 ZNF551Q7Z340 670 aaPredicted RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 P4HA3Q7Z4N8 544 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 R3HCC1LQ7Z5L2 792 aaKnown RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 C4orf33Q8N1A6 199 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 LRRN4CLQ8ND94 238 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 DUSP19Q8WTR2 217 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 SMPDL3BQ92485 455 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 NRGNQ92686 78 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 APOPT1Q96IL0 206 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 TBL1XR1Q9BZK7 514 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 CCM2LQ9NUG4 571 aaPredicted RBP11.91□□□□□ -0.5
MRPS35-202ENST00000536569 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 MED11Q9P086 117 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 NDRG3Q9UGV2 375 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 DNAJC15Q9Y5T4 150 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 AP4B1Q9Y6B7 739 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 MED13LQ71F56 2210 aa11.91□□□□□ -0.5
MRPS35-202ENST00000536569 A0A087WZY1 265 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 SLC22A20A6NK97 555 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 TMEM114B3SHH9 223 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 ALG1L2C9J202 215 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 UTS2O95399 124 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 TGM6O95932 706 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 MAPK1P28482 360 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 RPS3AP61247 264 aaKnown RBP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 UGT3A2Q3SY77 523 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 RFTN2Q52LD8 501 aaPredicted RBP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 FBXW10Q5XX13 1052 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 PAMR1Q6UXH9 720 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 LUZP2Q86TE4 346 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 TRABD2AQ86V40 505 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 MISPQ8IVT2 679 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 NATD1Q8N6N6 113 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 BANPQ8N9N5 519 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 NUP43Q8NFH3 380 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 OR2T11Q8NH01 316 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 LINC01560Q8TB33 94 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 FAM110BQ8TC76 370 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 GPR151Q8TDV0 419 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 PPP3R2Q96LZ3 170 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 MS4A4EQ96PG1 132 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 YIPF4Q9BSR8 244 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 ROPN1BQ9BZX4 212 aaPredicted RBP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 C12orf65Q9H3J6 166 aaKnown RBP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 TUBB1Q9H4B7 451 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 ROPN1Q9HAT0 212 aaPredicted RBP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 PAQR5Q9NXK6 330 aaPredicted RBP11.9□□□□□ -0.5
MRPS35-202ENST00000536569 GIN1Q9NXP7 522 aa11.9□□□□□ -0.5
MRPS35-202ENST00000536569 SH3BP4Q9P0V3 963 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms