RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 EPS8L3Q8TE67 593 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 EFHD2Q96C19 240 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 ZFP3Q96NJ6 502 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 AMDHD1Q96NU7 426 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 YIPF4Q9BSR8 244 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 LMF2Q9BU23 707 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 RTN4RQ9BZR6 473 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 TUBB1Q9H4B7 451 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 RRAGDQ9NQL2 400 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 MKS1Q9NXB0 559 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 TAS2R10Q9NYW0 307 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 NTMQ9P121 344 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 SONP18583 2426 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 TRIM64A6NGJ6 449 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 TRIM64BA6NI03 449 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 CLCA1A8K7I4 914 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 SLC28A1O00337 649 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 COPEO14579 308 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 SMPD2O60906 423 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 CRLF1O75462 422 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 IL33O95760 270 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 FGF4P08620 206 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 TMIGD3P0DMS9 266 aaPredicted RBP9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 KRT4P19013 534 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 STARP49675 285 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 AGFG1P52594 562 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 DSCR4P56555 118 aaPredicted RBP9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 CLDN15P56746 228 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 MRPS22P82650 360 aaKnown RBP9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 SORDQ00796 357 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 FOXF2Q12947 444 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 RCAN2Q14206 197 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 BCL2A1Q16548 175 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 UGT3A2Q3SY77 523 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 CFAP157Q5JU67 520 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 CLEC6AQ6EIG7 209 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 OR5M10Q6IEU7 315 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 AAGABQ6PD74 315 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 IFNEQ86WN2 208 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 OR2M3Q8NG83 312 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 OR2T11Q8NH01 316 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 TMEM158Q8WZ71 300 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 WNT2BQ93097 391 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 DTNBP1Q96EV8 351 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 SFXN3Q9BWM7 321 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 GATA5Q9BWX5 397 aaPredicted RBP9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 ANKZF1Q9H8Y5 726 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 C1orf109Q9NX04 203 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 FLRT3Q9NZU0 649 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 ABCG2Q9UNQ0 655 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 PTGDR2Q9Y5Y4 395 aa9.1□□□□□ -0.95
CLSTN3-203ENST00000534830 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 IGLV3-32A0A0A0MS00 114 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 TTC36A6NLP5 189 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 AZIN1O14977 448 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 LSM1O15116 133 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 TRIM13O60858 407 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 SEC22BO75396 215 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 DPP4P27487 766 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 NTSP30990 170 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 GCKP35557 465 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 KRT20P35900 424 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 SRYQ05066 204 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 PDE7AQ13946 482 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 ZNF385BQ569K4 471 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 EXOSC6Q5RKV6 272 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 KANK2Q63ZY3 851 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 PLXDC2Q6UX71 529 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 APOOLQ6UXV4 268 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 ZNF551Q7Z340 670 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 YTHDF3Q7Z739 585 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 TRABD2AQ86V40 505 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 C4orf33Q8N1A6 199 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 BANPQ8N9N5 519 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 LINC01560Q8TB33 94 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 FAM110BQ8TC76 370 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 GIMAP5Q96F15 307 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 TM9SF2Q99805 663 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 TRMOQ9BU70 441 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 DSN1Q9H410 356 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 LRTM1Q9HBL6 345 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 MIEF1Q9NQG6 463 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 OR10H1Q9Y4A9 318 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 DNAJC15Q9Y5T4 150 aa9.09□□□□□ -0.95
CLSTN3-203ENST00000534830 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 A8MXE2 369 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 H0Y3Z8 333 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 HAX1O00165 279 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 RGS14O43566 566 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 NPHS1O60500 1241 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 CRCPO75575 148 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 TNFSF13O75888 250 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 NKX2-2O95096 273 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 GOSR1O95249 250 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 TGM6O95932 706 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 IGKV1D-16P01601 117 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 NUDT17P0C025 328 aa9.08□□□□□ -0.96
CLSTN3-203ENST00000534830 NEFHP12036 1026 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms