RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 POLR2EP19388 210 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 MSH3P20585 1137 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 OTX2P32243 289 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 MNDAP41218 407 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 ATP5J2P56134 94 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 PMP22Q01453 160 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 RCN2Q14257 317 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 MORF4L2Q15014 288 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 TMEM249Q2WGJ8 235 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 SIRPB2Q5JXA9 342 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 SPECC1LQ69YQ0 1117 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 NEK5Q6P3R8 708 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 KCTD8Q6ZWB6 473 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC9B2Q86UD5 537 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 MMD2Q8IY49 270 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 TMEM86AQ8N2M4 240 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 PDCL2Q8N4E4 241 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 RASGEF1AQ8N9B8 481 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 TBCKQ8TEA7 893 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 DDI1Q8WTU0 396 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 SCARB1Q8WTV0 552 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 KRT35Q92764 455 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 FBXO32Q969P5 355 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 TSACCQ96A04 125 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 FAM71F1Q96KD3 344 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 GPR137Q96N19 417 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 IL17FQ96PD4 163 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 MAP3K3Q99759 626 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 HSD17B14Q9BPX1 270 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 LRRC1Q9BTT6 524 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 CACNG6Q9BXT2 260 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 ZNF350Q9GZX5 532 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 DPEP2Q9H4A9 486 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 FKRPQ9H9S5 495 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 TXNDC16Q9P2K2 825 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 ZNF510Q9Y2H8 683 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 TCHHQ07283 1943 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 DOCK10Q96BY6 2186 aa3.95□□□□□ -1.78
ECHDC1-223ENST00000534442 A0A1W2PS18 150 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 TRIM49BA6NDI0 452 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SLCO1B7G3V0H7 640 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC33A1O00400 549 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SCAMP2O15127 329 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 NTN1O95631 604 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 PLGP00747 810 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 ANKRD34CP0C6C1 535 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 RBMY1A1P0DJD3 496 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 IRF2P14316 349 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SOAT1P35610 550 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 PEX19P40855 299 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 NKX2-1P43699 371 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 CDX1P47902 265 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 ACTN3Q08043 901 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 GAGE5Q13069 117 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 GAGE6Q13070 117 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 ELAVL3Q14576 367 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 LASP1Q14847 261 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 TMEM132DQ14C87 1099 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 KYAT1Q16773 422 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 UGP2Q16851 508 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 PIP5KL1Q5T9C9 394 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 AGAP7PQ5VUJ5 663 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 ZNF449Q6P9G9 518 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 BTNL8Q6UX41 500 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 MACC1Q6ZN28 852 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 TAF8Q7Z7C8 310 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 RAB43Q86YS6 212 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 PLD3Q8IV08 490 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 CD302Q8IX05 232 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 OR4K1Q8NGD4 311 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 OR1J1Q8NGS3 322 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 MGARPQ8TDB4 240 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 ZNF473Q8WTR7 871 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 NUDCD2Q8WVJ2 157 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 HSD17B8Q92506 261 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SNX21Q969T3 373 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 MYLPFQ96A32 169 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 PDLIM5Q96HC4 596 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 MED30Q96HR3 178 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SPATA13Q96N96 652 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 AGAP4Q96P64 663 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 KLF6Q99612 283 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC17A9Q9BYT1 436 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 EML4Q9HC35 981 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 KCNMB3Q9NPA1 279 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 GSN-AS1Q9NRJ2 163 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 ADPRHL2Q9NX46 363 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 VPS18Q9P253 973 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 MPDZO75970 2070 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 KMT2AQ03164 3969 aa3.94□□□□□ -1.78
ECHDC1-223ENST00000534442 SRRM2Q9UQ35 2752 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 E7EWF7 191 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 CLDN3O15551 220 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC37A4O43826 429 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 HUS1O60921 280 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 SLC16A8O95907 504 aa3.93□□□□□ -1.78
ECHDC1-223ENST00000534442 ZDHHC11BP0C7U3 371 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms