RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 HS6ST2Q96MM7 605 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 RUNDC3BQ96NL0 473 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 QRFPRQ96P65 431 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 QKIQ96PU8 341 aaKnown RBP eCLIP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 ALS2CR12Q96Q35 445 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 OR1F2PQ96R84 312 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 CSF3RQ99062 836 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 ELAC2Q9BQ52 826 aaKnown RBP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 CCDC77Q9BR77 488 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 TMEM204Q9BSN7 226 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 SFXN3Q9BWM7 321 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 P2RY12Q9H244 342 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 GOLPH3Q9H4A6 298 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 TMEM184CQ9NVA4 438 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 PNPOQ9NVS9 261 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 ARGLU1Q9NWB6 273 aaPredicted RBP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 TMEM160Q9NX00 188 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 IFNKQ9P0W0 207 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 SPATA7Q9P0W8 599 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 FEZ2Q9UHY8 353 aaPredicted RBP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 PPIEQ9UNP9 301 aaKnown RBP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 PCDHGB3Q9Y5G1 929 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 PCDHA13Q9Y5I0 950 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC22A7Q9Y694 548 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 CHCHD2Q9Y6H1 151 aaPredicted RBP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 DYSFO75923 2080 aa2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 DYNC2H1Q8NCM8 4307 aaKnown RBP2.65□□□□□ -1.99
CHMP4A-208ENST00000534106 CADP27708 2225 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 IGHV4-61A0A0C4DH41 118 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 TMEM89A2RUT3 159 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 DPRXA6NFQ7 191 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 C17orf51A8MQB3 221 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 C17orf105B2RV13 164 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 H0Y3Z8 333 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 H3BUI4 141 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PSMD12O00232 456 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PRMT5O14744 637 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CD3EAPO15446 510 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PHGDHO43175 533 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FRS3O43559 492 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 LDB3O75112 727 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 AVILO75366 819 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PSIP1O75475 530 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NDUFS3O75489 264 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 URI1O94763 535 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SLU7O95391 586 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SMIM10L1P0DMW3 83 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 RNH1P13489 461 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CYP4B1P13584 511 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NPPBP16860 134 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NDUFB7P17568 137 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CHRM3P20309 590 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 IL10P22301 178 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 JAK1P23458 1154 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PSMA3P25788 255 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CERS1P27544 350 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 IMPA1P29218 277 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 RPL22P35268 128 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 HTR3AP46098 478 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 MARCKSL1P49006 195 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NR2C2P49116 596 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 COMPP49747 757 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CCR8P51685 355 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SUCLG1P53597 346 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PGGT1BP53609 377 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 DIO3P55073 304 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 MTTPP55157 894 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 EIF3BP55884 814 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CTXN1P60606 82 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 RPS15AP62244 130 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ACTG1P63261 375 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CRADDP78560 199 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 BTKQ06187 659 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NAE1Q13564 534 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 DYRK1AQ13627 763 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 GGTLC2Q14390 218 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PRPSAP1Q14558 356 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NAA25Q14CX7 972 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 HERC3Q15034 1050 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 TMED2Q15363 201 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CNN3Q15417 329 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 KLHL22Q53GT1 634 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FASTKD1Q53R41 847 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 BEX5Q5H9J7 111 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NHSL2Q5HYW2 709 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 TOR1AIP1Q5JTV8 583 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PPP1R2P3Q6NXS1 205 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ALKBH5Q6P6C2 394 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 OPN5Q6U736 354 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ENPP6Q6UWR7 440 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SYT10Q6XYQ8 523 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PIWIL4Q7Z3Z4 852 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PM20D2Q8IYS1 436 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PRR22Q8IZ63 422 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 KRT78Q8N1N4 520 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 RAB42Q8N4Z0 105 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM71DQ8N9W8 422 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM156AQ8NDB6 213 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 MCUQ8NE86 351 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM83FQ8NEG4 500 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms