RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	RAP1A	P62834	184 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	ZNF616	Q08AN1	781 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	ARL6IP1	Q15041	203 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	RABEPK	Q7Z6M1	372 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	MDGA1	Q8NFP4	955 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	OR51T1	Q8NGJ9	327 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CCNL2	Q96S94	520 aa	Predicted RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	VDAC3	Q9Y277	283 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	TRAV18	A0A075B6X5	111 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CLDN2	P57739	230 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CSNK2A1	P68400	391 aa	Predicted RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	FGL2	Q14314	439 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	PXK	Q7Z7A4	578 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CSNK2A3	Q8NEV1	391 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	FRS2	Q8WU20	508 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	STARD5	Q9NSY2	213 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	EBF1	Q9UH73	591 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	GOLGA4	Q13439	2230 aa	Known RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CNMD	O75829	334 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	RET	P07949	1114 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CDK2	P24941	298 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	KDELC1	Q6UW63	502 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	SLC16A9	Q7RTY1	509 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	IGFN1	Q86VF2	1251 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	ASCC1	Q8N9N2	400 aa	Known RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	TANK	Q92844	425 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	ACAD8	Q9UKU7	415 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	PCDHGA7	Q9Y5G6	932 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	MEGF11	A6BM72	1044 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	APLNR	P35414	380 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	NR0B2	Q15466	257 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	GCDH	Q92947	438 aa	Predicted RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	NEIL2	Q969S2	332 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	TSNAX	Q99598	290 aa	Known RBP	18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	CCDC32	Q9BV29	185 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	ZNF160	Q9HCG1	818 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	ERVK-19	Q9WJR5	959 aa		18.47	■□□□□ 0.55
FGFR1-238	ENST00000532791	PABPC4L	P0CB38	370 aa	Known RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	CCBE1	Q6UXH8	406 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	CPO	Q8IVL8	374 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	KLF16	Q9BXK1	252 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	GSTO2	Q9H4Y5	243 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791		H3BQ06	376 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	METTL2B	Q6P1Q9	378 aa	Known RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	SLC39A11	Q8N1S5	342 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	SYT14	Q8NB59	555 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	FAM71F1	Q96KD3	344 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	ALG8	Q9BVK2	526 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	XRN1	Q8IZH2	1706 aa	Known RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	CRTAP	O75718	401 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	CD79A	P11912	226 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	PCGF2	P35227	344 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	KDM1B	Q8NB78	822 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	NPRL2	Q8WTW4	380 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	CHFR	Q96EP1	664 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	PLEKHA3	Q9HB20	300 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	PDLIM7	Q9NR12	457 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	SDR39U1	Q9NRG7	319 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	UBL4A	P11441	157 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	FUT1	P19526	365 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	SF3B4	Q15427	424 aa	Known RBP eCLIP	18.46	■□□□□ 0.55	2e-6	■■■□□ 18.7
FGFR1-238	ENST00000532791	MRPL21	Q7Z2W9	205 aa	Known RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	CYB561A3	Q8NBI2	242 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	OR52E1	Q8NGJ3	308 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	ZMYND19	Q96E35	227 aa	Predicted RBP	18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	B3GALT1	Q9Y5Z6	326 aa		18.46	■□□□□ 0.55
FGFR1-238	ENST00000532791	C12orf71	A8MTZ7	269 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	NCS1	P62166	190 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	TAP2	Q03519	686 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	RIPPLY1	Q0D2K3	151 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	TP53I3	Q53FA7	332 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	PAGE3	Q5JUK9	113 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	OR9K2	Q8NGE7	335 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	SFXN5	Q8TD22	340 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	OR5B12	Q96R08	314 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	FOLH1B	Q9HBA9	442 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	RDH14	Q9HBH5	336 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	WDR37	Q9Y2I8	494 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	HMX3	A6NHT5	357 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	FGF4	P08620	206 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	BMP2	P12643	396 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	CHM	P24386	653 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	IVD	P26440	423 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	CDK3	Q00526	305 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	ISG20	Q96AZ6	181 aa	Known RBP	18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	SGCZ	Q96LD1	299 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	KLHL13	Q9P2N7	655 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	PTRH2	Q9Y3E5	179 aa	Known RBP	18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	KIR2DS5	A0A0G2JLQ3	304 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791		A0A0G2JNG1	304 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	KIR2DS3	K7RE56	304 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	GCH1	P30793	250 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	CTH	P32929	405 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	POLR2H	P52434	150 aa	Known RBP	18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	KIR2DS5	Q14953	304 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	TMEM239	Q8WW34	195 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	B3GNT3	Q9Y2A9	372 aa		18.45	■□□□□ 0.54
FGFR1-238	ENST00000532791	EFCAB7	A8K855	629 aa		18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms