RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SPACA9Q96E40 222 aaPredicted RBP16.25■□□□□ 0.19
CTSB-222ENST00000531551 ZNF350Q9GZX5 532 aa16.25■□□□□ 0.19
CTSB-222ENST00000531551 SLC38A1Q9H2H9 487 aa16.25■□□□□ 0.19
CTSB-222ENST00000531551 GMNNO75496 209 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 ZIC2O95409 532 aaPredicted RBP16.24■□□□□ 0.19
CTSB-222ENST00000531551 WDPCPO95876 746 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 CYP4B1P13584 511 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 HTR1EP28566 365 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 CASRP41180 1078 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 CYB561P49447 251 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 RNF144AP50876 292 aaPredicted RBP16.24■□□□□ 0.19
CTSB-222ENST00000531551 PNLIPRP2P54317 469 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTSB-222ENST00000531551 FRRS1Q6ZNA5 592 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 METTL25Q8N6Q8 603 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 OR10G3Q8NGC4 313 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 UTP23Q9BRU9 249 aaKnown RBP16.24■□□□□ 0.19
CTSB-222ENST00000531551 FLRT3Q9NZU0 649 aa16.24■□□□□ 0.19
CTSB-222ENST00000531551 A0A0G2JPF8 293 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 OR6C70A6NIJ9 312 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 HNRNPCL2B2RXH8 293 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 HNRNPCL3B7ZW38 293 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 CXCR6O00574 342 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 ABCB7O75027 752 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 ICOSLGO75144 302 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 HNRNPCL4P0DMR1 293 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 HPGDP15428 266 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 NAGAP17050 411 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 ARG2P78540 354 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 MFAP5Q13361 173 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 INTS11Q5TA45 600 aaKnown RBP16.23■□□□□ 0.19
CTSB-222ENST00000531551 GLYATQ6IB77 296 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 C19orf48Q6RUI8 117 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 CYP4Z2PQ8N1L4 340 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 ZNF619Q8N2I2 560 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 BBS10Q8TAM1 723 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 ZG16BQ96DA0 208 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 TMCO6Q96DC7 493 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 CNTNAP3BQ96NU0 1288 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 CNTNAP3Q9BZ76 1288 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 LRFN1Q9P244 771 aa16.23■□□□□ 0.19
CTSB-222ENST00000531551 ANKRD65E5RJM6 399 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 CEACAM4O75871 244 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 UTS2O95399 124 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 DCTP40126 519 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 CD96P40200 585 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 HLCSP50747 726 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 POLE2P56282 527 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 KCNJ2P63252 427 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 TUBA3CQ13748 450 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 VEZF1Q14119 521 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 EFR3AQ14156 821 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 NTRK2Q16620 822 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 ZNF791Q3KP31 576 aaPredicted RBP16.22■□□□□ 0.19
CTSB-222ENST00000531551 SPATS1Q496A3 300 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 LRRC23Q53EV4 343 aaPredicted RBP16.22■□□□□ 0.19
CTSB-222ENST00000531551 TUBA3EQ6PEY2 450 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 NUP54Q7Z3B4 507 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 SLC30A8Q8IWU4 369 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 OR4C3Q8NH37 302 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 SNRNP27Q8WVK2 155 aaKnown RBP16.22■□□□□ 0.19
CTSB-222ENST00000531551 FAM162AQ96A26 154 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 ARHGAP9Q9BRR9 750 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 MMADHCQ9H3L0 296 aaPredicted RBP16.22■□□□□ 0.19
CTSB-222ENST00000531551 MTHFD2LQ9H903 347 aaPredicted RBP16.22■□□□□ 0.19
CTSB-222ENST00000531551 CACYBPQ9HB71 228 aaKnown RBP16.22■□□□□ 0.19
CTSB-222ENST00000531551 MKRN2OSH3BPM6 223 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 TP53I11O14683 189 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 OPN1SWP03999 348 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 GGT1P19440 569 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 GRAMD1BQ3KR37 738 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 SPINK14Q6IE38 97 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 PGM2L1Q6PCE3 622 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 KRT73Q86Y46 540 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 SLC26A7Q8TE54 656 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 NODALQ96S42 347 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 ZNF607Q96SK3 696 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.22■□□□□ 0.194e-6■■■■□ 21.1
CTSB-222ENST00000531551 BCL2L10Q9HD36 194 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 POLE3Q9NRF9 147 aa16.22■□□□□ 0.19
CTSB-222ENST00000531551 MED13Q9UHV7 2174 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 M0QX08 132 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 KIAA0513O60268 411 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 UGT2B17O75795 530 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 ATP12AP54707 1039 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 BNIP2Q12982 314 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 PEX5LQ8IYB4 626 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 DND1Q8IYX4 353 aaKnown RBP16.21■□□□□ 0.19
CTSB-222ENST00000531551 SPPL2AQ8TCT8 520 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 HGDQ93099 445 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 SAP130Q9H0E3 1048 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 UBQLN4Q9NRR5 601 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 KLRF1Q9NZS2 232 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 SUCOQ9UBS9 1254 aaKnown RBP16.21■□□□□ 0.19
CTSB-222ENST00000531551 SLC7A8Q9UHI5 535 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 ZNF451Q9Y4E5 1061 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 SNX13Q9Y5W8 968 aa16.21■□□□□ 0.19
CTSB-222ENST00000531551 ANKRD11Q6UB99 2663 aaPredicted RBP16.21■□□□□ 0.18
CTSB-222ENST00000531551 CENPVL1A0A0U1RR11 272 aa16.2■□□□□ 0.18
CTSB-222ENST00000531551 OR5H15A6NDH6 313 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms