RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SERTAD2Q14140 314 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 ZNHIT3Q15649 155 aaPredicted RBP14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 ZBED5Q49AG3 693 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 EIPR1Q53HC9 387 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 ENTPD8Q5MY95 495 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 ZC3H14Q6PJT7 736 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 OR2I1PQ8NGU4 316 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 ZNF578Q96N58 590 aaPredicted RBP14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 OR1F2PQ96R84 312 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 YIPF2Q9BWQ6 316 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 DUSP21Q9H596 190 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 POLE3Q9NRF9 147 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 SEMA4GQ9NTN9 838 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 NTNG1Q9Y2I2 539 aa14.34□□□□□ -0.11
CCDC90B-213ENST00000529611 FER1L5A0AVI2 2057 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 AP3D1O14617 1153 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 YKT6O15498 198 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 CYP7B1O75881 506 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 JUNBP17275 347 aaPredicted RBP14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 PAX7P23759 505 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 MMP11P24347 488 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ZNF136P52737 540 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 DSG2Q14126 1118 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 RAB39AQ14964 217 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 MRPL2Q5T653 305 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 TMEM236Q5W0B7 351 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 NPSR1Q6W5P4 371 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ZER1Q7Z7L7 766 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 CCDC103Q8IW40 242 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 LINC00471Q8N535 108 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 OR4N2Q8NGD1 307 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 RHOXF1Q8NHV9 184 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 PMM1Q92871 262 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 CNDP2Q96KP4 475 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 PTCHD1Q96NR3 888 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 NODALQ96S42 347 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 MCHR1Q99705 422 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 PELOQ9BRX2 385 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 RHNO1Q9BSD3 238 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ZNF226Q9NYT6 803 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 CDC14AQ9UNH5 594 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 TPRKBQ9Y3C4 175 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 MMACHCQ9Y4U1 282 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 FRYLO94915 3013 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 A0A087WUU8 490 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 DSCR3O14972 297 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 SOX14O95416 240 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 GABRB1P18505 474 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 GSTT1P30711 240 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 HOXD12P35452 270 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 CCL7P80098 99 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ST3GAL3Q11203 375 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 BIKQ13323 160 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ILKQ13418 452 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 TRAM2Q15035 370 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 PLEKHM3Q6ZWE6 761 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 DEPDC4Q8N2C3 294 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 EID2Q8N6I1 236 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ZNF615Q8N8J6 731 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 C16orf52Q8NHV5 167 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 SLC38A4Q969I6 547 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 FKBP10Q96AY3 582 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 NMD3Q96D46 503 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 TSC22D3Q99576 134 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 POLR2J3Q9H1A7 115 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 OR10A5Q9H207 317 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 ANKRD19PQ9H560 264 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 VCX3AQ9NNX9 186 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 SCN3BQ9NY72 215 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 FBXO4Q9UKT5 387 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 SLC6A14Q9UN76 642 aa14.33□□□□□ -0.12
CCDC90B-213ENST00000529611 IGKV3D-11A0A0A0MRZ8 115 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 A0A1B0GX78 115 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 CDHR4A6H8M9 788 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 M0R129 80 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 IGKV1D-16P01601 117 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 CLPSP04118 112 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 THY1P04216 161 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 TP53P04637 393 aaPredicted RBP14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 RPLP0P05388 317 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 IGFBP1P08833 259 aaPredicted RBP14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 ANKRD34CP0C6C1 535 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 CT45A8P0DMV1 189 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 CT45A9P0DMV2 189 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 FBLP22087 321 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 POU1F1P28069 291 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 RFX3P48380 749 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 PLAURQ03405 335 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 FLYWCH1Q4VC44 716 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 CT45A2Q5DJT8 189 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 C1orf94Q6P1W5 598 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 CD300LDQ6UXZ3 194 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 QSOX2Q6ZRP7 698 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 ARHGAP22Q7Z5H3 698 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 DTWD2Q8NBA8 298 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 TSLPQ969D9 159 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 GPA33Q99795 319 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 ZNF304Q9HCX3 659 aa14.32□□□□□ -0.12
CCDC90B-213ENST00000529611 RSL24D1Q9UHA3 163 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms