RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 A0A1W2PRB8 838 aa30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 ERLIN1O75477 346 aa30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 LAMP1P11279 417 aa30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 DSCR4P56555 118 aaPredicted RBP30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 EXOSC6Q5RKV6 272 aaKnown RBP30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 CPTPQ5TA50 214 aa30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 GPR151Q8TDV0 419 aa30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 ZNF395Q9H8N7 513 aaPredicted RBP30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 NOP53Q9NZM5 478 aaKnown RBP30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 DKKL1Q9UK85 242 aa30.01■■■□□ 2.39
SSSCA1-205ENST00000527920 GXYLT2A0PJZ3 443 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 B4DXG7 233 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 SCO2O43819 266 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 CHMP24386 653 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 DPP4P27487 766 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 SLC1A6P48664 564 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 PRKAG1P54619 331 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 RCAN2Q14206 197 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 GANABQ14697 944 aaKnown RBP30■■■□□ 2.39
SSSCA1-205ENST00000527920 OR5M10Q6IEU7 315 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 LIX1LQ8IVB5 337 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 TRIM42Q8IWZ5 723 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 OR5P2Q8WZ92 322 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 FAM120BQ96EK7 910 aaKnown RBP30■■■□□ 2.39
SSSCA1-205ENST00000527920 RMND5BQ96G75 393 aaPredicted RBP30■■■□□ 2.39
SSSCA1-205ENST00000527920 SORT1Q99523 831 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 C20orf27Q9GZN8 174 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 HHATLQ9HCP6 504 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 FLRT3Q9NZU0 649 aa30■■■□□ 2.39
SSSCA1-205ENST00000527920 MBD3L4A6NDZ8 208 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 MBD3L3A6NE82 208 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 MBD3L5A6NJ08 208 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 ZIC3O60481 467 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 UTS2O95399 124 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 NGFRP08138 427 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 LCN1P31025 176 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 PRIM2P49643 509 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 RPL14P50914 215 aaKnown RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 PDCD2Q16342 344 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 SZRD1Q7Z422 152 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 CAMKMTQ7Z624 323 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 LRRC34Q8IZ02 419 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 OR2M3Q8NG83 312 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 MBD3L2Q8NHZ7 208 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 PIK3R3Q92569 461 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 BHLHE41Q9C0J9 482 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 SLC24A3Q9HC58 644 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 NEUROD4Q9HD90 331 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 GIN1Q9NXP7 522 aa29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 ZNF629Q9UEG4 869 aaPredicted RBP29.99■■■□□ 2.39
SSSCA1-205ENST00000527920 INTS1Q8N201 2190 aaKnown RBP29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 ARHGAP21Q5T5U3 1957 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 IL2RAP01589 272 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 IGKV1D-16P01601 117 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 ACP2P11117 423 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 BGNP21810 368 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 CPEB4Q17RY0 729 aaKnown RBP eCLIP29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 LSM12Q3MHD2 195 aaKnown RBP29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 DMRTC2Q8IXT2 367 aaPredicted RBP29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 KRTCAP2Q8N6L1 136 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 SLC16A11Q8NCK7 471 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 TNIP2Q8NFZ5 429 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 FAM110BQ8TC76 370 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 SLC9A6Q92581 669 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 SFXN2Q96NB2 322 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 UCN2Q96RP3 112 aa29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 ZCCHC3Q9NUD5 404 aaKnown RBP29.98■■■□□ 2.39
SSSCA1-205ENST00000527920 HCFC1P51610 2035 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 IGLV3-32A0A0A0MS00 114 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 KDM4EB2RXH2 506 aaPredicted RBP29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 DVL2O14641 736 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 G6PDP11413 515 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 EFNA1P20827 205 aaPredicted RBP29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 RFX3P48380 749 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 DIO3P55073 304 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 CLDN8P56748 225 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 STX3Q13277 289 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 BCL2A1Q16548 175 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 DUSP5Q16690 384 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 ADGRE4PQ86SQ3 457 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 NAXEQ8NCW5 288 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 TRIB1Q96RU8 372 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 TBL1XR1Q9BZK7 514 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 DSN1Q9H410 356 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 PTGES2Q9H7Z7 377 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 AKTIPQ9H8T0 292 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 DUSP22Q9NRW4 184 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 MED12Q93074 2177 aa29.97■■■□□ 2.39
SSSCA1-205ENST00000527920 SOX30O94993 753 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 ALOX5P09917 674 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 LHX2P50458 406 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 SLC18A1P54219 525 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 OR56A1Q8NGH5 318 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 STACQ99469 402 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 RTN4RQ9BZR6 473 aa29.96■■■□□ 2.39
SSSCA1-205ENST00000527920 DCHS2Q6V1P9 2916 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 C17orf51A8MQB3 221 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 ALG1L2C9J202 215 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 KCNK2O95069 426 aa29.95■■■□□ 2.39
SSSCA1-205ENST00000527920 HMGN2P05204 90 aaKnown RBP29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms