RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CNIH4Q9P003 139 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 CPNE7Q9UBL6 633 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 LOC105369274A0A096LPK9 316 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 KIR2DS5A0A0G2JLQ3 304 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 A0A0G2JNG1 304 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 LOC102723532A0A0G2JNH3 316 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 A0A0J9YY10 115 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 TCRBV21S2A2A0A5A6 115 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 KIR2DS3K7RE56 304 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 PTTG1O95997 202 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 AK1P00568 194 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 DBIP07108 87 aaKnown RBP14.32□□□□□ -0.12
USH1C-207ENST00000527720 RORCP51449 518 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 UBE2IP63279 158 aaKnown RBP14.32□□□□□ -0.12
USH1C-207ENST00000527720 KIR2DS5Q14953 304 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 STEAP3Q658P3 488 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 RANBP3LQ86VV4 465 aaPredicted RBP14.32□□□□□ -0.12
USH1C-207ENST00000527720 NKAIN4Q8IVV8 208 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 OR4N4Q8N0Y3 316 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 ZNF619Q8N2I2 560 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 CDRT4Q8N9R6 151 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 FAM3CQ92520 227 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 GSDMCQ9BYG8 508 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 MMP17Q9ULZ9 603 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 PCDHGB6Q9Y5F9 930 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 PRAMEF26H0Y7S4 382 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 SEMA4FO95754 770 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 GABRG2P18507 467 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 SOX18P35713 384 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 RPS19P39019 145 aaKnown RBP14.31□□□□□ -0.12
USH1C-207ENST00000527720 PAQR6Q6TCH4 344 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 OR4N5Q8IXE1 308 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 POGLUT1Q8NBL1 392 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 CCDC32Q9BV29 185 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 QPCTLQ9NXS2 382 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 ZNF229Q9UJW7 825 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 SURF4O15260 269 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 STX11O75558 287 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 GPR75O95800 540 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 THY1P04216 161 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 LIPKQ5VXJ0 399 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 ZNF620Q6ZNG0 422 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 LAPTM4BQ86VI4 370 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 NRMQ8IXM6 262 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 CADM3Q8N126 398 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 CACTIN-AS1Q8N1I8 211 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 CEP19Q96LK0 163 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 EVA1AQ9H8M9 152 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 SMURF1Q9HCE7 757 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 TRAPPC4Q9Y296 219 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 CDH10Q9Y6N8 788 aa14.31□□□□□ -0.12
USH1C-207ENST00000527720 SOX30O94993 753 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 IL1AP01583 271 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 HMGN1P05114 100 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 ZNF136P52737 540 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 MLLT1Q03111 559 aaPredicted RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 TPBGQ13641 420 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 PLK5Q496M5 336 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 TRMT12Q53H54 448 aaKnown RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 DCST2Q5T1A1 773 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 RNF113BQ8IZP6 322 aaKnown RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 NELL2Q99435 816 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 SLC30A2Q9BRI3 323 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 EVA1BQ9NVM1 165 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 CLDND1Q9NY35 253 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 USP36Q9P275 1121 aaKnown RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 IQCMA0A1B0GVH7 501 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 TRAPPC13A5PLN9 417 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 CYR61O00622 381 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 GALR3O60755 368 aaPredicted RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 FMO6PO60774 539 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 DNAJB6O75190 326 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 TSPAN19P0C672 248 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 GNSP15586 552 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 CCR5P51681 352 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 DEFA1P59665 94 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 DEFA3P59666 94 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 HOXC5Q00444 222 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 RUNX1T1Q06455 604 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 PGGHGQ32M88 737 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 MEX3DQ86XN8 651 aaKnown RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 POC5Q8NA72 575 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 OR13H1Q8NG92 308 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 TMEM255BQ8WV15 326 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 MSLNLQ96KJ4 702 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 WDFY2Q96P53 400 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 POLE4Q9NR33 117 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 POLE3Q9NRF9 147 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 HRASLS2Q9NWW9 162 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 SLC7A7Q9UM01 511 aa14.3□□□□□ -0.12
USH1C-207ENST00000527720 MRPS2Q9Y399 296 aaKnown RBP14.3□□□□□ -0.12
USH1C-207ENST00000527720 FGF17O60258 216 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 NID1P14543 1247 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 MAP3K8P41279 467 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 LSSP48449 732 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 CDH11P55287 796 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 MAP4K2Q12851 820 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 GPR68Q15743 365 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 PRICKLE4Q2TBC4 344 aa14.29□□□□□ -0.12
USH1C-207ENST00000527720 AADACL4Q5VUY2 407 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms