RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 EXOSC6Q5RKV6 272 aaKnown RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 CCNJQ5T5M9 372 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 PRSS41Q7RTY9 318 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 OR10G6Q8NH81 332 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 GPR151Q8TDV0 419 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 TMEM203Q969S6 136 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 SLC38A2Q96QD8 506 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 SDF2Q99470 211 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 EVA1BQ9NVM1 165 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 TRAPPC4Q9Y296 219 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 V9GYH0 126 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 EYSQ5T1H1 3165 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 CH25HO95992 272 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 AGR2O95994 175 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 MSL3P1P0C860 447 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 STAT5AP42229 794 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 LSSP48449 732 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 SRP54P61011 504 aaKnown RBP16.39■□□□□ 0.21
USH1C-205ENST00000527020 RPS25P62851 125 aaKnown RBP16.39■□□□□ 0.21
USH1C-205ENST00000527020 AADACL4Q5VUY2 407 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 DESI1Q6ICB0 168 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 MBOAT2Q6ZWT7 520 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 RRM2BQ7LG56 351 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 LAX1Q8IWV1 398 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 SAMD14Q8IZD0 417 aaPredicted RBP16.39■□□□□ 0.21
USH1C-205ENST00000527020 TMEM52Q8NDY8 209 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 OR9Q1Q8NGQ5 310 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 PATE1Q8WXA2 126 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 GATAD2BQ8WXI9 593 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 C14orf119Q9NWQ9 140 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 PTGFRNQ9P2B2 879 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 CEP290O15078 2479 aa16.39■□□□□ 0.21
USH1C-205ENST00000527020 STK25O00506 426 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 CDC42EP2O14613 210 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 TNFRSF10CO14798 259 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 SSX4O60224 188 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 CDRT1O95170 752 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 CLEC2LP0C7M8 214 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 NDUFV2P19404 249 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 PTNP21246 168 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 PSPHP78330 225 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 MXD1Q05195 221 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 HTR4Q13639 388 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 TPBGQ13641 420 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 LARS2Q15031 903 aaKnown RBP16.38■□□□□ 0.21
USH1C-205ENST00000527020 MAPK14Q16539 360 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 C22orf42Q6IC83 251 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 KIAA1324Q6UXG2 1013 aaKnown RBP16.38■□□□□ 0.21
USH1C-205ENST00000527020 TMEM92Q6UXU6 159 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 ZNF620Q6ZNG0 422 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 FLCNQ8NFG4 579 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 SLC25A46Q96AG3 418 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 CEP19Q96LK0 163 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 CCDC32Q9BV29 185 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 SLC7A7Q9UM01 511 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 C19orf53Q9UNZ5 99 aaPredicted RBP16.38■□□□□ 0.21
USH1C-205ENST00000527020 IQCMA0A1B0GVH7 501 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 IRGMA1A4Y4 181 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 PVRP15151 417 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 DUSP8Q13202 625 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 SELENBP1Q13228 472 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 ADAM15Q13444 863 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 PLK5Q496M5 336 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 SFTPA2Q8IWL1 248 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 PEX5LQ8IYB4 626 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 FAM3CQ92520 227 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 OSTF1Q92882 214 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 WDFY2Q96P53 400 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 TPK1Q9H3S4 243 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 TRIM45Q9H8W5 580 aaPredicted RBP16.38■□□□□ 0.21
USH1C-205ENST00000527020 ISYNA1Q9NPH2 558 aa16.38■□□□□ 0.21
USH1C-205ENST00000527020 EXOSC1Q9Y3B2 195 aaKnown RBP16.38■□□□□ 0.21
USH1C-205ENST00000527020 SLC35F4A4IF30 521 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 SNTNA6NMZ2 147 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 H0YGG7 62 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 H3BQ06 376 aaPredicted RBP16.37■□□□□ 0.21
USH1C-205ENST00000527020 ATP6V1G1O75348 118 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 IL1AP01583 271 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 PRG2P13727 222 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
USH1C-205ENST00000527020 TLX1P31314 330 aaPredicted RBP16.37■□□□□ 0.21
USH1C-205ENST00000527020 IFNA8P32881 189 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 TPMTP51580 245 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 ARF3P61204 181 aaPredicted RBP16.37■□□□□ 0.21
USH1C-205ENST00000527020 ZNF79Q15937 498 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 ZMAT1Q5H9K5 638 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 CCBE1Q6UXH8 406 aaPredicted RBP16.37■□□□□ 0.21
USH1C-205ENST00000527020 LAPTM4BQ86VI4 370 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 GALNT12Q8IXK2 581 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 TXNDC15Q96J42 360 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 ZFYVE21Q9BQ24 234 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 PRSS27Q9BQR3 290 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 ZNF649Q9BS31 505 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 ZNF350Q9GZX5 532 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 PRDM9Q9NQV7 894 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 FBXO34Q9NWN3 711 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 PLEKHB1Q9UF11 243 aaPredicted RBP16.37■□□□□ 0.21
USH1C-205ENST00000527020 IL20RAQ9UHF4 553 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 MUTYHQ9UIF7 546 aa16.37■□□□□ 0.21
USH1C-205ENST00000527020 KCNE5Q9UJ90 142 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms