RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ACSL5Q9ULC5 683 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 GRID1Q9ULK0 1009 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 PDE10AQ9Y233 779 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 ASF1AQ9Y294 204 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 COMMD10Q9Y6G5 202 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 EXPH5Q8NEV8 1989 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 CREBBPQ92793 2442 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 MN1Q10571 1320 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TNRC6AQ8NDV7 1962 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 IGHV5-51A0A0C4DH38 117 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 IGKV1-8A0A0C4DH67 115 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 A0A0G2JNG1 304 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 IQANK1A0A1B0GTG1 560 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OR6C74A6NCV1 312 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 NCF1BA6NI72 391 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 LILRA5A6NI73 299 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CBY3A6NI87 242 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 NCF1CA8MVU1 366 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 G3V2L1 256 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 H3BMH7 237 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 H3BQF6 201 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 EIF3FO00303 357 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 IFRD1O00458 451 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 NUDT21O43809 227 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KLK8O60259 260 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ZG16O60844 167 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KERAO60938 352 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CDH16O75309 829 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SPAG7O75391 227 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 NDUFB4O95168 129 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KLHL2O95198 593 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KCNK5O95279 499 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SIX3O95343 332 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 LDOC1O95751 146 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 GUCA1CO95843 209 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SLC16A8O95907 504 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 C9P02748 559 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TK1P04183 234 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 APOA4P06727 396 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SNRPAP09012 282 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SLC35G4P0C7Q5 338 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ALPPL2P10696 532 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 NCF1P14598 390 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 PVRP15151 417 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CKMT2P17540 419 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SRD5A1P18405 259 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 POLR2CP19387 275 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CHATP28329 748 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ALDH4A1P30038 563 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ATP5DP30049 168 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 RYKP34925 604 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 PPARGP37231 505 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CDKN1AP38936 164 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ETV5P41161 510 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CAPZBP47756 277 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SLC6A12P48065 614 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 GABRA4P48169 554 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SERPINB8P50452 374 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SERPINB9P50453 376 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KPNA2P52292 529 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 BRWD1-AS2P59051 145 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TBPL1P62380 186 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KIR2DS5Q14953 304 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 PCLAFQ15004 111 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 RASA2Q15283 850 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 FCN2Q15485 313 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ZIC1Q15915 447 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 KRT71Q3SY84 523 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 MAP9Q49MG5 647 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ADNP2Q6IQ32 1131 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 LRRC8EQ6NSJ5 796 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 C19orf48Q6RUI8 117 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 UNC5DQ6UXZ4 953 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 RAPH1Q70E73 1250 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 PRSS45Q7RTY3 260 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 GLRX5Q86SX6 157 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SLC9B2Q86UD5 537 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 NKAPQ8N5F7 415 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 Q8N9G6 341 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 BANPQ8N9N5 519 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OR4E2Q8NGC2 313 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OR2A1Q8NGT9 310 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OR9A1PQ8NGU1 263 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 HMGCLL1Q8TB92 370 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 TCP10LQ8TDR4 215 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 LRRC8CQ8TDW0 803 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CREB3L4Q8TEY5 395 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SETD7Q8WTS6 366 aaKnown RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SKA2Q8WVK7 121 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ASZ1Q8WWH4 475 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 EXT2Q93063 718 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 PYCR2Q96C36 320 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 RHBDF1Q96CC6 855 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 CXorf40BQ96DE9 158 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OR2A14Q96R47 310 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 OR4K3Q96R72 315 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 MAP3K3Q99759 626 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 SH3GL2Q99962 352 aa2.75□□□□□ -1.97
CSDE1-208ENST00000524652 ROPN1BQ9BZX4 212 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms