RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	ZNF311	Q5JNZ3	666 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	PAPPA-AS1	Q5QFB9	102 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	LIPJ	Q5W064	366 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	SNRNP48	Q6IEG0	339 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	TTC27	Q6P3X3	843 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356		Q6ZPB1	254 aa	Predicted RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	TRPM8	Q7Z2W7	1104 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	CPEB2	Q7Z5Q1	589 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	COMMD2	Q86X83	199 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	GPSM1	Q86YR5	675 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	MUC20	Q8N307	709 aa	Predicted RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	TMEM105	Q8N8V8	129 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	OR11H4	Q8NGC9	324 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	OR13J1	Q8NGT2	312 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	FGFBP3	Q8TAT2	258 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	SDR42E1	Q8WUS8	393 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	MITD1	Q8WV92	249 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	OR1E3	Q8WZA6	343 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	SEMA4D	Q92854	862 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	RPL3L	Q92901	407 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	PINX1	Q96BK5	328 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	HAVCR1	Q96D42	359 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	COQ2	Q96H96	371 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	ART5	Q96L15	291 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	CXorf58	Q96LI9	332 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	FAM20A	Q96MK3	541 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	PANX2	Q96RD6	677 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	TGS1	Q96RS0	853 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	CMKLR1	Q99788	373 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	CHRDL1	Q9BU40	450 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	NUSAP1	Q9BXS6	441 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	TRIM9	Q9C026	710 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	VN1R1	Q9GZP7	353 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	DNTTIP1	Q9H147	329 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	MTIF3	Q9H2K0	278 aa	Known RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	ACTL8	Q9H568	366 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	SPACA1	Q9HBV2	294 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	LRRC4	Q9HBW1	653 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	SGK2	Q9HBY8	427 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	PDP1	Q9P0J1	537 aa	Predicted RBP	3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	NSG2	Q9Y328	171 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	MROH7	Q68CQ1	1323 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	ROBO3	Q96MS0	1386 aa		3.84	□□□□□ -1.79
PCM1-223	ENST00000524356	ZNF292	O60281	2723 aa		3.84	□□□□□ -1.8
PCM1-223	ENST00000524356		A0A0G2JMZ2	1700 aa		3.84	□□□□□ -1.8
PCM1-223	ENST00000524356	MYO10	Q9HD67	2058 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	OTOGL	Q3ZCN5	2332 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	ZFYVE26	Q68DK2	2539 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	TRAV18	A0A075B6X5	111 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356		A0A087WUV0	522 aa	Predicted RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	GABRR3	A8MPY1	467 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	LOC730098	B7Z3J9	87 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	DVL1	O14640	695 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	TRDMT1	O14717	391 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	HSPA12A	O43301	675 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	PI15	O43692	258 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	OR1F1	O43749	312 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	UPK3A	O75631	287 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	RAF1	P04049	648 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	ALPI	P09923	528 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	UBTFL1	P0CB47	393 aa	Predicted RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	TROVE2	P10155	538 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	DBT	P11182	482 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	EZR	P15311	586 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	MX1	P20591	662 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	CSNK1E	P49674	416 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	LIMK2	P53671	638 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	RPS15	P62841	145 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	CSNK2B	P67870	215 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	XIAP	P98170	497 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	ENPP2	Q13822	863 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	COTL1	Q14019	142 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	EXOSC7	Q15024	291 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	ZSWIM7	Q19AV6	140 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	IZUMO4	Q1ZYL8	232 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	FAM83E	Q2M2I3	478 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	PHLDA2	Q53GA4	152 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	ARMCX4	Q5H9R4	360 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	DEGS2	Q6QHC5	323 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	FAM57B	Q71RH2	274 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	ANO5	Q75V66	913 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	C16orf62	Q7Z3J2	963 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	SLC22A16	Q86VW1	577 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	TPRA1	Q86W33	373 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	FBXO16	Q8IX29	292 aa	Predicted RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	CRYBG2	Q8N1P7	616 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	OR4L1	Q8NH43	312 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	OR14A16	Q8NHC5	309 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	CLHC1	Q8NHS4	586 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	RNF128	Q8TEB7	428 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	GIPC3	Q8TF64	312 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	PIGC	Q92535	297 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	P3H4	Q92791	437 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	RBM41	Q96IZ5	413 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	RPRD1A	Q96P16	312 aa	Predicted RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	CCDC3	Q9BQI4	270 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	FUNDC2	Q9BWH2	189 aa		3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	TDRD1	Q9BXT4	1180 aa	Known RBP	3.83	□□□□□ -1.8
PCM1-223	ENST00000524356	GAN	Q9H2C0	597 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms