RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RAP2AP10114 183 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 KRT20P35900 424 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 NRG3P56975 720 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 PLCXD2Q0VAA5 305 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 DUSP7Q16829 419 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 ZNF311Q5JNZ3 666 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 VRK2Q86Y07 508 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 ADAMTS17Q8TE56 1095 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 RASSF5Q8WWW0 418 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 CHID1Q9BWS9 393 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 MAGIXQ9H6Y5 334 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 RNPEPL1Q9HAU8 725 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 ARMC1Q9NVT9 282 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 BAG5Q9UL15 447 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 ZNF232Q9UNY5 417 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 WASF3Q9UPY6 502 aa19.73■□□□□ 0.75
R3HCC1-208ENST00000522012 TMEM200CA6NKL6 621 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 IL33O95760 270 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 MT-ND1P03886 318 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 GUSBP08236 651 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 PABPC4LP0CB38 370 aaKnown RBP19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 CD247P20963 164 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 KCNJ5P48544 419 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 PSMD4P55036 377 aaKnown RBP19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 TCTN3Q6NUS6 607 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 TAGAPQ8N103 731 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 SLC34A3Q8N130 599 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 PROX1Q92786 737 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 PMM1Q92871 262 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 OMA1Q96E52 524 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 NAF1Q96HR8 494 aaKnown RBP19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 IP6K3Q96PC2 410 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 MYOTQ9UBF9 498 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 NKX1-2Q9UD57 310 aaPredicted RBP19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 IFT52Q9Y366 437 aa19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 CNOT1A5YKK6 2376 aaKnown RBP19.72■□□□□ 0.75
R3HCC1-208ENST00000522012 AGAP5A6NIR3 686 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 TIPRLO75663 272 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 ANPEPP15144 967 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 IL7RP16871 459 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 TNFRSF1BP20333 461 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 ABCD3P28288 659 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 IL12BP29460 328 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 PSPHP78330 225 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 KCNJ10P78508 379 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 SRSF6Q13247 344 aaKnown RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 CLN3Q13286 438 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 IFI44LQ53G44 452 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 PAPD5Q8NDF8 572 aaKnown RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 GPR32P1Q8NGA4 272 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 DIO2Q92813 273 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 ADOQ96SZ5 270 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 RSPO3Q9BXY4 272 aaPredicted RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 SH3GLB1Q9Y371 365 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 CENPVL1A0A0U1RR11 272 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 HNRNPRO43390 633 aaKnown RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 UGT2B17O75795 530 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 DBIP07108 87 aaKnown RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 FESP07332 822 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 ITGAMP11215 1152 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 Q0VFX4 171 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 LARS2Q15031 903 aaKnown RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 MAPK14Q16539 360 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 GLIPR1L2Q4G1C9 344 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 AP1ARQ63HQ0 302 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 PINK1Q9BXM7 581 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 YY1AP1Q9H869 796 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 KCNE5Q9UJ90 142 aa19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 ZNF443Q9Y2A4 671 aaPredicted RBP19.71■□□□□ 0.75
R3HCC1-208ENST00000522012 CCDC88CQ9P219 2028 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 OR2J2O76002 312 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 DCTP40126 519 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 OR1E2P47887 323 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 RNF144AP50876 292 aaPredicted RBP19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 KBTBD2Q8IY47 623 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 ZNF614Q8N883 585 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 ZNF354BQ96LW1 612 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 ZBTB20Q9HC78 741 aaPredicted RBP19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 STX18Q9P2W9 335 aaKnown RBP19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 SLC13A4Q9UKG4 626 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 MSRB2Q9Y3D2 182 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 NPFFR2Q9Y5X5 522 aa19.7■□□□□ 0.74
R3HCC1-208ENST00000522012 WDFY3Q8IZQ1 3526 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 hCG_2039718K7EN88 272 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 TSPAN2O60636 221 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 UTS2O95399 124 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 SEMG1P04279 462 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 SERPINA7P05543 415 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 THBS1P07996 1170 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 HOXB6P17509 224 aaKnown RBP19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 RPS4Y1P22090 263 aaKnown RBP19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 PRKAR1BP31321 381 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 ATP12AP54707 1039 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 LIN52Q52LA3 116 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 PDZK1Q5T2W1 519 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 ATP1A1-AS1Q5TC04 95 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 IRAK1BP1Q5VVH5 260 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 FCRLBQ6BAA4 426 aa19.69■□□□□ 0.74
R3HCC1-208ENST00000522012 DHRS4L2Q6PKH6 230 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms