RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ZNF443Q9Y2A4 671 aaPredicted RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 HELZ2Q9BYK8 2649 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 LRP4O75096 1905 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 MAGEB3O15480 346 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 LAMTOR5O43504 91 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 UBXN7O94888 489 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 EPPINO95925 133 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 EIF2S1P05198 315 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 RPLP0P05388 317 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 DCNP07585 359 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 RNH1P13489 461 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 RPS4Y1P22090 263 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 CDH3P22223 829 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 FPR3P25089 353 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 GALNSP34059 522 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 MAP3K8P41279 467 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 LSSP48449 732 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 GSSP48637 474 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 PCYT1AP49585 367 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 CLK1P49759 484 aaKnown RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 EPHA4P54764 986 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 C21orf59P57076 290 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 RGS8P57771 180 aaPredicted RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 SIM1P81133 766 aaPredicted RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 SPEM2Q0P670 501 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 BNIP3Q12983 259 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 TCTE1Q5JU00 501 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 MFSD4BQ5TF39 518 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 SLC36A4Q6YBV0 504 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ZNF730Q6ZMV8 503 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 FRRS1Q6ZNA5 592 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 Q6ZPB1 254 aaPredicted RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 USP43Q70EL4 1123 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 SLC46A3Q7Z3Q1 461 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ZNF438Q7Z4V0 828 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ZER1Q7Z7L7 766 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 LACC1Q8IV20 430 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ZNF595Q8IYB9 648 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 SLC43A2Q8N370 569 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 CAMKK1Q8N5S9 505 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 SLC16A11Q8NCK7 471 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ZBTB44Q8NCP5 570 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 OR6C4Q8NGE1 309 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 TEX47Q8TBZ9 253 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ZNF285Q96NJ3 590 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 FCRL4Q96PJ5 515 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 SDF2Q99470 211 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 RSPO3Q9BXY4 272 aaPredicted RBP9.29□□□□□ -0.92
SPARC-202ENST00000520687 EQTNQ9NQ60 294 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 FBXO8Q9NRD0 319 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ENAMQ9NRM1 1142 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 ERGIC3Q9Y282 383 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 KCNE3Q9Y6H6 103 aa9.29□□□□□ -0.92
SPARC-202ENST00000520687 A0A1W2PR77 199 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 CYSRT1A8MQ03 144 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 EFCAB9A8MZ26 197 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 CLDN4O14493 209 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 AIREO43918 545 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 CTNSO60931 367 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 HMGN1P05114 100 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 STSP08842 583 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 ALPPL2P10696 532 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 ACP2P11117 423 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 NT5EP21589 574 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 MMP11P24347 488 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 TGFBR2P37173 567 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 CAPZBP47756 277 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 PSMD4P55036 377 aaKnown RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 VSX2P58304 361 aaPredicted RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 STARD6P59095 220 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 HNRNPKP61978 463 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPARC-202ENST00000520687 POU6F2P78424 691 aaPredicted RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 AQP6Q13520 282 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 C1DQ13901 141 aaKnown RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 GINS1Q14691 196 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 SPCS2Q15005 226 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 ZNHIT3Q15649 155 aaPredicted RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 LTB4RQ15722 352 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 PRICKLE4Q2TBC4 344 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 TYW3Q6IPR3 259 aaKnown RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 SLC27A4Q6P1M0 643 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 TUBA3EQ6PEY2 450 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 OGFOD3Q6PK18 319 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 FAM111BQ6SJ93 734 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 Q6ZS52 159 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 PLEKHM3Q6ZWE6 761 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 MBOAT2Q6ZWT7 520 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 MED25Q71SY5 747 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 C17orf82Q86X59 251 aaPredicted RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 ARHGEF39Q8N4T4 335 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 AMER2Q8N7J2 671 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 ZCCHC14Q8WYQ9 949 aaKnown RBP9.28□□□□□ -0.92
SPARC-202ENST00000520687 SLC9A6Q92581 669 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 CDS1Q92903 461 aa9.28□□□□□ -0.92
SPARC-202ENST00000520687 RFKQ969G6 155 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms