RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 KCNJ10P78508 379 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SCGB2B2Q4G0G5 96 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMEM35AQ53FP2 167 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 WDR45BQ5MNZ6 344 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 QSOX2Q6ZRP7 698 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 TIGD4Q8IY51 512 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SYNPOQ8N3V7 929 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SIMC1Q8NDZ2 872 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR5T3Q8NGG3 340 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ASB11Q8WXH4 323 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SNAPC3Q92966 411 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 HDHD5Q9BXW7 423 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 A0A1W2PRG6 482 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 WRBO00258 174 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 GASTP01350 101 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 F8A1P23610 371 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 GRPRP30550 384 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 RPS15AP62244 130 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 HBA1P69905 142 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 MEX3DQ86XN8 651 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SDR16C5Q8N3Y7 309 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SAMD12Q8N8I0 201 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR51L1Q8NGJ5 315 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 HIST1H2AAQ96QV6 131 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ANTXRLA6NF34 631 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 FAM227AF5H4B4 570 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPR37L1O60883 481 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 HEXBP07686 556 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ACPPP15309 386 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 CERS1P27544 350 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 COX20Q5RI15 118 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ALG1LQ6GMV1 187 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZC3H14Q6PJT7 736 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PTOV1Q86YD1 416 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 CPXM2Q8N436 756 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 L3MBTL4Q8NA19 623 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR5D16Q8NGK9 328 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 RLN3Q8WXF3 142 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 RBP7Q96R05 134 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PLCXD1Q9NUJ7 323 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PRODH2Q9UF12 536 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PRELID1Q9Y255 219 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 NAALAD2Q9Y3Q0 740 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SIP14410 1827 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 TRAV6A0A075B6T7 132 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 UGDHO60701 494 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 CYB5AP00167 134 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 PSMB5P28074 263 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 RPS5P46782 204 aaKnown RBP10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC7A9P82251 487 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 GBX1Q14549 363 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 KLHL26Q53HC5 615 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 VASH1Q7L8A9 365 aaPredicted RBP10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF550Q7Z398 422 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 TRMT2BQ96GJ1 504 aaKnown RBP10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 MARCH5Q9NX47 278 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 EXTL2Q9UBQ6 330 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 DNAJC13O75165 2243 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF432O94892 652 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 CCNOP22674 350 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 HOXA9P31269 272 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 DDOSTP39656 456 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 HTR3AP46098 478 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 GAS6Q14393 721 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 KIAA0040Q15053 153 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMEM225Q6GV28 225 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 RASSF6Q6ZTQ3 369 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 WDR53Q7Z5U6 358 aaPredicted RBP10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 DTD2Q96FN9 168 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 DNMT3BQ9UBC3 853 aaKnown RBP10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 HCN2Q9UL51 889 aa10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 EXOSC1Q9Y3B2 195 aaKnown RBP10.21□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPX5O75715 221 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 SCG5P05408 212 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 ITGB7P26010 798 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 HOXC5Q00444 222 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 GAB1Q13480 694 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FXNQ16595 210 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 CNIH2Q6PI25 160 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 DNM1P34Q6PK57 102 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 KLBQ86Z14 1044 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 VRK3Q8IV63 474 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 NRMQ8IXM6 262 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 C10orf111Q8N326 155 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 RASGEF1AQ8N9B8 481 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 OR2A12Q8NGT7 310 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM46AQ96IP4 442 aaKnown RBP10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FUZQ9BT04 418 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 CPEB1Q9BZB8 566 aaKnown RBP10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 CST11Q9H112 138 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 TMEM184CQ9NVA4 438 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 CLEC2DQ9UHP7 191 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 AP1M2Q9Y6Q5 423 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 MICAL3Q7RTP6 2002 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM186AA6NE01 2351 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 FAM221BA6H8Z2 402 aa10.21□□□□□ -0.78
PCDHGA1-202ENST00000517417 LYRM1O43325 122 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms